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Mario Caccamo
Mario Caccamo
NIAB
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Cited by
Year
The zebrafish reference genome sequence and its relationship to the human genome
K Howe, MD Clark, CF Torroja, J Torrance, C Berthelot, M Muffato, ...
Nature 496 (7446), 498-503, 2013
51012013
Genome sequence of the Brown Norway rat yields insights into mammalian evolution
University of Utah Weiss Robert B. 14 Dunn Diane M. 14, ...
Nature 428 (6982), 493-521, 2004
25202004
Control of Treg and TH17 cell differentiation by the aryl hydrocarbon receptor
FJ Quintana, AS Basso, AH Iglesias, T Korn, MF Farez, E Bettelli, ...
Nature 453 (7191), 65-71, 2008
20332008
A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome
International Wheat Genome Sequencing Consortium (IWGSC), ...
Science 345 (6194), 1251788, 2014
15452014
Ensembl 2007
TJP Hubbard, BL Aken, K Beal, B Ballester, M Cáccamo, Y Chen, ...
Nucleic acids research 35 (suppl_1), D610-D617, 2007
15392007
A physical, genetic and functional sequence assembly of the barley genome.
KF Mayer, R Waugh, P Langridge, TJ Close, RP Wise, A Graner, ...
Nature 491, 711-716, 2012
15382012
Analyses of pig genomes provide insight into porcine demography and evolution
MAM Groenen, AL Archibald, H Uenishi, CK Tuggle, Y Takeuchi, ...
Nature 491 (7424), 393-398, 2012
14832012
A chromosome conformation capture ordered sequence of the barley genome
M Mascher, H Gundlach, A Himmelbach, S Beier, SO Twardziok, T Wicker, ...
Nature 544 (7651), 427-433, 2017
13602017
De novo assembly and genotyping of variants using colored de Bruijn graphs
Z Iqbal, M Caccamo, I Turner, P Flicek, G McVean
Nature genetics 44 (2), 226-232, 2012
7902012
Ancient hybridizations among the ancestral genomes of bread wheat
T Marcussen, SR Sandve, L Heier, M Spannagl, M Pfeifer, ...
science 345 (6194), 1250092, 2014
7222014
Assemblathon 1: a competitive assessment of de novo short read assembly methods
D Earl, K Bradnam, JS John, A Darling, D Lin, J Fass, HOK Yu, V Buffalo, ...
Genome research 21 (12), 2224-2241, 2011
6332011
Ensembl 2008
P Flicek, BL Aken, K Beal, B Ballester, M Cáccamo, Y Chen, L Clarke, ...
Nucleic acids research 36 (suppl_1), D707-D714, 2007
6182007
An overview of Ensembl
E Birney, TD Andrews, P Bevan, M Caccamo, Y Chen, L Clarke, G Coates, ...
Genome research 14 (5), 925-928, 2004
5622004
Ensembl 2006
E Birney, D Andrews, M Cáccamo, Y Chen, L Clarke, G Coates, T Cox, ...
Nucleic acids research 34 (suppl_1), D556-D561, 2006
4862006
Conservation and divergence of gene families encoding components of innate immune response systems in zebrafish
C Stein, M Caccamo, G Laird, M Leptin
Genome biology 8, 1-23, 2007
4562007
gEVAL—a web-based browser for evaluating genome assemblies
W Chow, K Brugger, M Caccamo, I Sealy, J Torrance, K Howe
Bioinformatics 32 (16), 2508-2510, 2016
3982016
Genomic regulatory blocks encompass multiple neighboring genes and maintain conserved synteny in vertebrates
H Kikuta, M Laplante, P Navratilova, AZ Komisarczuk, PG Engström, ...
Genome research 17 (5), 545-555, 2007
3862007
The European Genome-phenome Archive of human data consented for biomedical research
I Lappalainen, J Almeida-King, V Kumanduri, A Senf, JD Spalding, ...
Nature genetics 47 (7), 692-695, 2015
3682015
Ensembl 2004
E Birney, D Andrews, P Bevan, M Caccamo, G Cameron, Y Chen, ...
Nucleic acids research 32 (suppl_1), D468-D470, 2004
2332004
NextClip: an analysis and read preparation tool for Nextera Long Mate Pair libraries
RM Leggett, BJ Clavijo, L Clissold, MD Clark, M Caccamo
Bioinformatics 30 (4), 566-568, 2014
2312014
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Articles 1–20