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André Elias Rodrigues Soares
André Elias Rodrigues Soares
National Bioinformatics Infrastructure of Sweden (NBIS), SciLifeLab, Uppsala University, Sweden
Verified email at ebc.uu.se
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Year
Dense sampling of bird diversity increases power of comparative genomics
S Feng, J Stiller, Y Deng, J Armstrong, QI Fang, AH Reeve, D Xie, G Chen, ...
Nature 587 (7833), 252-257, 2020
3532020
Bison phylogeography constrains dispersal and viability of the Ice Free Corridor in western Canada
PD Heintzman, D Froese, JW Ives, AER Soares, GD Zazula, B Letts, ...
Proceedings of the National Academy of Sciences 113 (29), 8057-8063, 2016
1872016
Ancient genomes from North Africa evidence prehistoric migrations to the Maghreb from both the Levant and Europe
R Fregel, FL Méndez, Y Bokbot, D Martín-Socas, MD Camalich-Massieu, ...
Proceedings of the National Academy of Sciences 115 (26), 6774-6779, 2018
1662018
Natural selection shaped the rise and fall of passenger pigeon genomic diversity
GGR Murray, AER Soares, BJ Novak, NK Schaefer, JA Cahill, AJ Baker, ...
Science 358 (6365), 951-954, 2017
1392017
Fossil and genomic evidence constrains the timing of bison arrival in North America
D Froese, M Stiller, PD Heintzman, AV Reyes, GD Zazula, AER Soares, ...
Proceedings of the National Academy of Sciences 114 (13), 3457-3462, 2017
1022017
Inferring species divergence times using pairwise sequential Markovian coalescent modelling and low-coverage genomic data
JA Cahill, AER Soares, RE Green, B Shapiro
Philosophical Transactions of the Royal Society B: Biological Sciences 371 …, 2016
722016
Parrot genomes and the evolution of heightened longevity and cognition
M Wirthlin, NCB Lima, RLM Guedes, AER Soares, LGP Almeida, ...
Current Biology 28 (24), 4001-4008. e7, 2018
702018
Genomic evidence of widespread admixture from polar bears into brown bears during the last ice age
JA Cahill, PD Heintzman, K Harris, MD Teasdale, J Kapp, AER Soares, ...
Molecular Biology and Evolution 35 (5), 1120-1129, 2018
682018
Complete mitochondrial genomes of living and extinct pigeons revise the timing of the columbiform radiation
AER Soares, BJ Novak, J Haile, TH Heupink, J Fjeldså, MTP Gilbert, ...
BMC Evolutionary Biology 16, 1-9, 2016
582016
Mitogenomics of the Extinct Cave Lion, Panthera spelaea (Goldfuss, 1810), Resolve its Position within the Panthera Cats
R Barnett, MLZ Mendoza, AER Soares, SYW Ho, G Zazula, N Yamaguchi, ...
Open Quaternary 2 (4), 1-11, 2016
552016
On the nomenclature of the American clade of weasels (Carnivora: Mustelidae)
BD Patterson, HE Ramírez-Chaves, JF Vilela, AE Rodrigues Soares, ...
Journal of Animal Diversity 3 (2), 1-8, 2021
522021
An ancient bison from the mouth of the Rauchua River (Chukotka, Russia)
IV Kirillova, OG Zanina, OF Chernova, EG Lapteva, SS Trofimova, ...
Quaternary Research 84 (2), 232-245, 2015
452015
Combining fossil and molecular data to date the diversification of New World Primates
CG Schrago, B Mello, AER Soares
Journal of Evolutionary Biology 26 (11), 2438-2446, 2013
442013
The influence of taxon sampling on Bayesian divergence time inference under scenarios of rate heterogeneity among lineages
AER Soares, CG Schrago
Journal of Theoretical Biology 364, 31-39, 2015
382015
Demographic reconstruction from ancient DNA supports rapid extinction of the great auk
JE Thomas, GR Carvalho, J Haile, NJ Rawlence, MD Martin, SYW Ho, ...
Elife 8, e47509, 2019
352019
Comparative genomics of MRSA strains from human and canine origins reveals similar virulence gene repertoire
B Penna, MB Silva, AER Soares, ATR Vasconcelos, MS Ramundo, ...
Scientific reports 11 (1), 4724, 2021
252021
The Influence of Taxon Sampling and Tree Shape on Molecular Dating: An Empirical Example from Mammalian Mitochondrial Genomes
AER Soares, CG Schrago
Bioinformatics and Biology Insights, 129-143, 2012
222012
Paleogenomics
BS Peter D Heintzman*, Andre E R Soares*, Dan Chang
Reviews in Cell Biology and Molecular Medicine 1 (3), 243–267, 2015
19*2015
Morphological and genetic identification and isotopic study of the hair of a cave lion (Panthera spelaea Goldfuss, 1810) from the Malyi Anyui River (Chukotka, Russia)
OF Chernova, IV Kirillova, B Shapiro, FK Shidlovskiy, AER Soares, ...
Quaternary Science Reviews 142, 61-73, 2016
162016
Comparative mitogenomic analyses of Amazona parrots and Psittaciformes
NCB Lima, AER Soares, LGP Almeida, IR Costa, FM Sato, P Schneider, ...
Genetics and molecular biology 41, 593-604, 2018
132018
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