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Zhiqiang Ye
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The yak genome and adaptation to life at high altitude
Q Qiu, G Zhang, T Ma, W Qian, J Wang, Z Ye, C Cao, Q Hu, J Kim, ...
Nature genetics 44 (8), 946-949, 2012
8712012
Antibiotic treatment enhances the genome-wide mutation rate of target cells
H Long, SF Miller, C Strauss, C Zhao, L Cheng, Z Ye, K Griffin, R Te, ...
Proceedings of the National Academy of Sciences 113 (18), E2498-E2505, 2016
2042016
A New Reference Genome Assembly for the Microcrustacean Daphnia pulex
Z Ye, S Xu, K Spitze, J Asselman, X Jiang, MS Ackerman, J Lopez, ...
G3: Genes, Genomes, Genetics 7 (5), 1405-1416, 2017
1042017
Phylogenomic reconstruction of lactic acid bacteria: an update
ZG Zhang, ZQ Ye, L Yu, P Shi
BMC Evolutionary Biology 11, 1-12, 2011
952011
Hybridization and the Origin of Contagious Asexuality in Daphnia pulex
S Xu, K Spitze, MS Ackerman, Z Ye, L Bright, N Keith, CE Jackson, ...
Molecular biology and evolution 32 (12), 3215-3225, 2015
632015
Population Genomics of Daphnia pulex
M Lynch, R Gutenkunst, M Ackerman, K Spitze, Z Ye, T Maruki, Z Jia
Genetics 206 (1), 315-332, 2017
612017
Genetic control of male production in Daphnia pulex
Z Ye, C Molinier, C Zhao, CR Haag, M Lynch
Proceedings of the National Academy of Sciences 116 (31), 15602-15609, 2019
262019
The rapid, mass invasion of New Zealand by North American Daphniapulex
Z Ye, E Williams, C Zhao, CW Burns, M Lynch
Limnology and Oceanography 66 (7), 2672-2683, 2021
202021
Insertion Polymorphisms of Mobile Genetic Elements in Sexual and Asexual Populations of Daphnia pulex
X Jiang, H Tang, Z Ye, M Lynch
Genome biology and evolution 9 (2), 362-374, 2017
182017
Chromosomal rearrangements preserve adaptive divergence in ecological speciation
CE Jackson, S Xu, Z Ye, ME Pfrender, M Lynch, JK Colbourne, JR Shaw
BioRxiv, 2021.08. 20.457158, 2021
102021
Evolutionary genomics of a subdivided species
T Maruki, Z Ye, M Lynch
Molecular biology and evolution 39 (8), msac152, 2022
92022
Genome-Wide Allele-Specific Expression in Obligately Asexual Daphnia pulex and the Implications for the Genetic Basis of Asexuality
Z Ye, X Jiang, ME Pfrender, M Lynch
Genome biology and evolution 13 (11), evab243, 2021
92021
Genetic Diversity, Heteroplasmy, and Recombination in Mitochondrial Genomes of Daphnia pulex, Daphnia pulicaria, and Daphnia obtusa
Z Ye, C Zhao, RT Raborn, M Lin, W Wei, Y Hao, M Lynch
Molecular biology and evolution 39 (4), msac059, 2022
82022
Evolution of sex determination in crustaceans
Z Ye, T Bishop, Y Wang, R Shahriari, M Lynch
Marine Life Science & Technology 5 (1), 1-11, 2023
72023
The Linkage-Disequilibrium and Recombinational Landscape in Daphnia pulex
M Lynch, Z Ye, L Urban, T Maruki, W Wei
Genome biology and evolution 14 (11), evac145, 2022
72022
The genome-wide signature of short-term temporal selection
M Lynch, W Wei, Z Ye, M Pfrender
bioRxiv, 2023
32023
Evolutionary Genomics of Sister Species Differing in Effective Population Sizes and Recombination Rates
Z Ye, ME Pfrender, M Lynch
Genome Biology and Evolution 15 (11), evad202, 2023
12023
Evolutionary insights from a large-scale survey of population-genomic variation
Z Ye, W Wei, ME Pfrender, M Lynch
Molecular biology and evolution 40 (11), msad233, 2023
12023
Mitogenomic architecture and evolution of the soil ciliates Colpoda
Y Zhang, H Li, Y Wang, M Nie, K Zhang, J Pan, Y Zhang, Z Ye, RA Zufall, ...
Msystems 9 (2), e01161-23, 2024
2024
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