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Jie Wang
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An integrated encyclopedia of DNA elements in the human genome.
BE Bernstein, E Birney, I Dunham, ED Green, C Gunter, M Snyder
Nature 489 (7414), 57, 2012
17084*2012
A user's guide to the encyclopedia of DNA elements (ENCODE)
RM Myers, J Stamatoyannopoulos, M Snyder, I Dunham, RC Hardison, ...
PLoS Biology 9 (4), e1001046, 2011
14782011
Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors
J Wang, J Zhuang, S Iyer, XY Lin, TW Whitfield, MC Greven, BG Pierce, ...
Genome Research 22 (9), 1798-1812, 2012
10682012
Unsupervised pattern discovery in human chromatin structure through genomic segmentation
MM Hoffman, OJ Buske, J Wang, Z Weng, JA Bilmes, WS Noble
Nature methods 9 (5), 473, 2012
7322012
Factorbook. org: a Wiki-based database for transcription factor-binding data generated by the ENCODE consortium
J Wang, J Zhuang, S Iyer, XY Lin, MC Greven, BH Kim, J Moore, ...
Nucleic acids research 41 (D1), D171-D176, 2012
4412012
An Ancient Transcription Factor Initiates the Burst of piRNA Production during Early Meiosis in Mouse Testes
XZ Li, CK Roy, X Dong, E Bolcun-Filas, J Wang, BW Han, J Xu, MJ Moore, ...
Molecular Cell, 2013
4232013
Transposition-driven genomic heterogeneity in the Drosophila brain
PN Perrat, S DasGupta, J Wang, W Theurkauf, Z Weng, M Rosbash, ...
Science 340 (6128), 91-95, 2013
2672013
Adaptation to P element transposon invasion in Drosophila melanogaster
JS Khurana, J Wang, J Xu, BS Koppetsch, TC Thomson, A Nowosielska, ...
Cell 147 (7), 1551-1563, 2011
2632011
UAP56 Couples piRNA Clusters to the Perinuclear Transposon Silencing Machinery
F Zhang, J Wang, J Xu, Z Zhang, BS Koppetsch, N Schultz, T Vreven, ...
Cell 151 (4), 871-884, 2012
2562012
Genomic binding profiles of functionally distinct RNA polymerase III transcription complexes in human cells
Z Moqtaderi, J Wang, D Raha, RJ White, M Snyder, Z Weng, K Struhl
Nature Structural and Molecular Biology 17 (5), 635, 2010
2542010
Developmental regulation and individual differences of neuronal H3K4me3 epigenomes in the prefrontal cortex
I Cheung, HP Shulha, Y Jiang, A Matevossian, J Wang, Z Weng, ...
Proceedings of the National Academy of Sciences 107 (19), 8824-8829, 2010
2522010
The HP1 homolog rhino anchors a nuclear complex that suppresses piRNA precursor splicing
Z Zhang, J Wang, N Schultz, F Zhang, SS Parhad, S Tu, T Vreven, ...
Cell 157 (6), 1353-1363, 2014
2422014
Epigenetic signatures of autism: trimethylated H3K4 landscapes in prefrontal neurons
HP Shulha, I Cheung, C Whittle, J Wang, D Virgil, CL Lin, Y Guo, ...
Archives of general psychiatry 69 (3), 314-324, 2012
2282012
Functional analysis of transcription factor binding sites in human promoters
TW Whiteld, J Wang, PJ Collins, EC Partridge, SF Aldred, ND Trinklein, ...
Genome Biology 13 (9), R50, 2012
2112012
Heterotypic piRNA Ping-Pong requires qin, a protein with both E3 ligase and Tudor domains
Z Zhang, J Xu, BS Koppetsch, J Wang, C Tipping, S Ma, Z Weng, ...
Molecular cell 44 (4), 572-584, 2011
1832011
Organization of the Caenorhabditis elegans small non-coding transcriptome: genomic features, biogenesis, and expression
W Deng, X Zhu, G Skogerbø, Y Zhao, Z Fu, Y Wang, H He, L Cai, H Sun, ...
Genome research 16 (1), 20-29, 2006
1542006
NONCODE v2. 0: decoding the non-coding
S He, C Liu, G Skogerbø, H Zhao, J Wang, T Liu, B Bai, Y Zhao, R Chen
Nucleic acids research 36 (suppl_1), D170-D172, 2007
1432007
TEMP: a computational method for analyzing transposable element polymorphism in populations
J Zhuang, J Wang, W Theurkauf, Z Weng
Nucleic acids research 42 (11), 6826-6838, 2014
1372014
NPInter: the noncoding RNAs and protein related biomacromolecules interaction database
T Wu, J Wang, C Liu, Y Zhang, B Shi, X Zhu, Z Zhang, G Skogerbø, ...
Nucleic acids research 34 (suppl_1), D150-D152, 2006
1132006
Identification of cis regulatory features in the embryonic zebrafish genome through large-scale profiling of H3K4me1 and H3K4me3 binding sites
AW Aday, LJ Zhu, A Lakshmanan, J Wang, ND Lawson
Developmental biology 357 (2), 450-462, 2011
1012011
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