Sarah Cohen-Boulakia

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Susan DavidsonUniversity of PennsylvaniaVerified email at cis.upenn.edu
Frédéric LemoineInstitut PasteurVerified email at pasteur.fr
Ulf LeserKnowledge Management in Bioinformatics, Humboldt-Universität zu BerlinVerified email at informatik.hu-berlin.de
Christophe PradalUMR AGAP, CIRAD & Zenith, InriaVerified email at cirad.fr
Bryan BrancotteInstitut Pasteur – Hub de Bioinformatique et Biostatistique – Département Biologie ComputationnelleVerified email at pasteur.fr
Alain DeniseUniversité Paris-SaclayVerified email at lri.fr
Juliana FreireNew York UniversityVerified email at nyu.edu
Patrick ValduriezInriaVerified email at inria.fr
Carole GobleProfessor of Computer Science, University of ManchesterVerified email at manchester.ac.uk
Alban GaignardCNRSVerified email at univ-nantes.fr
Sanjeev KhannaHenry Salvatori Professor of Computer Science, University of PennsylvaniaVerified email at cis.upenn.edu
Johannes StarlingerComputer Science PostDoc, Humboldt-Universität zu BerlinVerified email at informatik.hu-berlin.de
Jerome ChopardResearch associateVerified email at polytechnique.org
Khalid BelhajjamePSL, Université Paris-Dauphine, LAMSADEVerified email at dauphine.fr
Christian FournierINRAEVerified email at inrae.fr
Hervé MénagerInstitut PasteurVerified email at pasteur.fr
Michael MielewczikAgroscopeVerified email at agroscope.admin.ch
Sylvie HamelProfesseure titulaire, Informatique et recherche opérationnelle, Université de MontréalVerified email at umontreal.ca
Carmem HaraProfessor of Computer Science, Federal University of Parana, BrazilVerified email at inf.ufpr.br
Pierre LarmandeIRD (Institute of Research for Development) - DIADE UnitVerified email at ird.fr

Sarah Cohen-Boulakia

Professor, Université Paris-Saclay

Verified email at lri.fr - Homepage

Scientific workflows Workflows Provenance Ranking Data Integration


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Provenance in Scientific Workflow Systems S Davidson, S Cohen-Boulakia, A Eyal, B Ludascher, T McPhillips, ... IEEE Data Engineering Bulletin 32, 44-50, 2007	968*	2007
NGPhylogeny. fr: new generation phylogenetic services for non-specialists F Lemoine, D Correia, V Lefort, O Doppelt-Azeroual, F Mareuil, ... Nucleic acids research 47 (W1), W260-W265, 2019	689	2019
The first provenance challenge L Moreau, B Ludäscher, I Altintas, RS Barga, S Bowers, S Callahan, ... Concurrency and computation: practice and experience 20 (5), 409-418, 2008	307	2008
Scientific workflows for computational reproducibility in the life sciences: Status, challenges and opportunities S Cohen-Boulakia, K Belhajjame, O Collin, J Chopard, C Froidevaux, ... Future Generation Computer Systems 75, 284-298, 2017	190	2017
Querying and managing provenance through user views in scientific workflows O Biton, S Cohen-Boulakia, SB Davidson, CS Hara Data Engineering, 2008. ICDE 2008. IEEE 24th International Conference on …, 2008	190	2008
FAIR computational workflows C Goble, S Cohen-Boulakia, S Soiland-Reyes, D Garijo, Y Gil, MR Crusoe, ... Data Intelligence 2 (1-2), 108-121, 2020	181	2020
The CoLoMoTo interactive notebook: accessible and reproducible computational analyses for qualitative biological networks A Naldi, C Hernandez, N Levy, G Stoll, PT Monteiro, C Chaouiya, ... Frontiers in physiology 9, 680, 2018	102	2018
Towards a model of provenance and user views in scientific workflows S Cohen, S Cohen-Boulakia, S Davidson Data Integration in the Life Sciences, 264-279, 2006	93	2006
Differencing provenance in scientific workflows Z Bao, S Cohen-Boulakia, SB Davidson, A Eyal, S Khanna 2009 IEEE 25th International Conference on Data Engineering, 808-819, 2009	84	2009
Search, adapt, and reuse: the future of scientific workflows S Cohen-Boulakia, U Leser ACM SIGMOD Record 40 (2), 6-16, 2011	83	2011
Addressing the provenance challenge using zoom S Cohen‐Boulakia, O Biton, S Cohen, S Davidson Concurrency and Computation: Practice and Experience 20 (5), 497-506, 2008	83	2008
Zoom* UserViews: Querying Relevant Provenance in Workflow Systems. O Biton, SC Boulakia, SB Davidson VLDB 7, 1366-1369, 2007	77	2007
Similarity search for scientific workflows J Starlinger, B Brancotte, S Cohen-Boulakia, U Leser Proceedings of the VLDB Endowment (PVLDB) 7 (12), 1143-1154, 2014	75	2014
OpenAlea: scientific workflows combining data analysis and simulation C Pradal, C Fournier, P Valduriez, S Cohen-Boulakia Proceedings of the 27th international conference on scientific and …, 2015	65	2015
Rank aggregation with ties: Experiments and analysis B Brancotte, B Yang, G Blin, S Cohen-Boulakia, A Denise, S Hamel Proceedings of the VLDB Endowment (PVLDB) 8 (11), 1202-1213, 2015	57	2015
BioGuideSRS: querying multiple sources with a user-centric perspective S Cohen-Boulakia, O Biton, S Davidson, C Froidevaux Bioinformatics 23 (10), 1301-1303, 2007	53	2007
Data integration in the life sciences F Bastian, G Parmentier, J Roux, S Moretti, V Laudet, ... Lecture Notes in Computer Science, 124-131, 2008	50	2008
Proteome informatics II: bioinformatics for comparative proteomics F Lisacek, S Cohen‐Boulakia, RD Appel Proteomics 6 (20), 5445-5466, 2006	47	2006
Using medians to generate consensus rankings for biological data S Cohen-Boulakia, A Denise, S Hamel Scientific and Statistical Database Management: 23rd International …, 2011	44	2011
Distilling structure in Taverna scientific workflows: a refactoring approach S Cohen-Boulakia, J Chen, P Missier, C Goble, AR Williams, ... BMC bioinformatics 15, 1-14, 2014	38	2014

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