Matthew D. Clark
Cited by
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The zebrafish reference genome sequence and its relationship to the human genome
K Howe, MD Clark, CF Torroja, J Torrance, C Berthelot, M Muffato, ...
Nature 496 (7446), 498-503, 2013
Shifting the limits in wheat research and breeding using a fully annotated reference genome
International Wheat Genome Sequencing Consortium (IWGSC), R Appels, ...
Science 361 (6403), eaar7191, 2018
A chromosome conformation capture ordered sequence of the barley genome
M Mascher, H Gundlach, A Himmelbach, S Beier, SO Twardziok, T Wicker, ...
Nature 544 (7651), 427-433, 2017
Multiple wheat genomes reveal global variation in modern breeding
S Walkowiak, L Gao, C Monat, G Haberer, MT Kassa, J Brinton, ...
Nature 588 (7837), 277-283, 2020
An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations
BJ Clavijo, L Venturini, C Schudoma, GG Accinelli, G Kaithakottil, J Wright, ...
Genome research 27 (5), 885-896, 2017
Genomic innovation for crop improvement
MW Bevan, C Uauy, BBH Wulff, J Zhou, K Krasileva, MD Clark
Nature 543 (7645), 346-354, 2017
Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus
T Mock, RP Otillar, J Strauss, M McMullan, P Paajanen, J Schmutz, ...
Nature 541 (7638), 536-540, 2017
Genomic prediction unifies animal and plant breeding programs to form platforms for biological discovery
H JM, C T, M I, P W, E A, K A, J C, C C, G D, B F, A G, G G, D I, R I, R JM, ...
Nature Genetics 49 (9), 1297-1303, 2017
Accelerated cloning of a potato late blight–resistance gene using RenSeq and SMRT sequencing
K Witek, F Jupe, AI Witek, D Baker, MD Clark, JDG Jones
Nature biotechnology 34 (6), 656-660, 2016
NextClip: an analysis and read preparation tool for Nextera Long Mate Pair libraries
RM Leggett, BJ Clavijo, L Clissold, MD Clark, M Caccamo
Bioinformatics 30 (4), 566-568, 2014
A world of opportunities with nanopore sequencing
RM Leggett, MD Clark
Journal of experimental botany 68 (20), 5419-5429, 2017
A crucial component of the endoderm formation pathway, CASANOVA, is encoded by a novel sox-related gene
T Dickmeis, P Mourrain, L Saint-Etienne, N Fischer, P Aanstad, M Clark, ...
Genes & development 15 (12), 1487-1492, 2001
Zebrafish breeding in the laboratory environment
A Nasiadka, MD Clark
ILAR journal 53 (2), 161-168, 2012
New approaches for metagenome assembly with short reads
M Ayling, MD Clark, RM Leggett
Briefings in bioinformatics 21 (2), 584-594, 2020
Multi-parent populations in crops: a toolbox integrating genomics and genetic mapping with breeding
MF Scott, O Ladejobi, S Amer, AR Bentley, J Biernaskie, SA Boden, ...
Heredity 125 (6), 396-416, 2020
Rapid MinION profiling of preterm microbiota and antimicrobial-resistant pathogens
RM Leggett, C Alcon-Giner, D Heavens, S Caim, TC Brook, M Kujawska, ...
Nature microbiology 5 (3), 430-442, 2020
Construction of a map-based reference genome sequence for barley, Hordeum vulgare L.
S Beier, A Himmelbach, C Colmsee, XQ Zhang, RA Barrero, Q Zhang, L Li, ...
Scientific Data 4 (1), 1-24, 2017
Zebrafish Dkk1, induced by the pre-MBT Wnt signaling, is secreted from the prechordal plate and patterns the anterior neural plate
M Shinya, C Eschbach, M Clark, H Lehrach, M Furutani-Seiki
Mechanisms of development 98 (1-2), 3-17, 2000
Nanopore adaptive sampling: a tool for enrichment of low abundance species in metagenomic samples
S Martin, D Heavens, Y Lan, S Horsfield, MD Clark, RM Leggett
Genome biology 23 (1), 11, 2022
The ash dieback invasion of Europe was founded by two genetically divergent individuals
M McMullan, M Rafiqi, G Kaithakottil, BJ Clavijo, L Bilham, E Orton, ...
Nature Ecology & Evolution 2 (6), 1000-1008, 2018
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