Jenni Hultman
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A communal catalogue reveals Earth’s multiscale microbial diversity
LR Thompson, JG Sanders, D McDonald, A Amir, J Ladau, KJ Locey, ...
Nature 551 (7681), 457-463, 2017
Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill
OU Mason, TC Hazen, S Borglin, PSG Chain, EA Dubinsky, JL Fortney, ...
The ISME journal 6 (9), 1715-1727, 2012
Multi-omics of permafrost, active layer and thermokarst bog soil microbiomes
J Hultman, MP Waldrop, R Mackelprang, MM David, J McFarland, ...
Nature 521 (7551), 208-212, 2015
Bacterial diversity at different stages of the composting process
P Partanen, J Hultman, L Paulin, P Auvinen, M Romantschuk
BMC microbiology 10 (1), 1-11, 2010
Maternal gut and breast milk microbiota affect infant gut antibiotic resistome and mobile genetic elements
K Pärnänen, A Karkman, J Hultman, C Lyra, J Bengtsson-Palme, ...
Nature communications 9 (1), 3891, 2018
Activity, diversity and population size of ammonia-oxidising bacteria in oil-contaminated landfarming soil
J Kurola, M Salkinoja-Salonen, T Aarnio, J Hultman, M Romantschuk
FEMS microbiology letters 250 (1), 33-38, 2005
Assessment of the Deepwater Horizon oil spill impact on Gulf coast microbial communities
R Lamendella, S Strutt, S Borglin, R Chakraborty, N Tas, OU Mason, ...
Frontiers in microbiology 5, 130, 2014
Host range of antibiotic resistance genes in wastewater treatment plant influent and effluent
J Hultman, M Tamminen, K Pärnänen, J Cairns, A Karkman, M Virta
FEMS microbiology ecology 94 (4), fiy038, 2018
Meat processing plant microbiome and contamination patterns of cold-tolerant bacteria causing food safety and spoilage risks in the manufacture of vacuum-packaged cooked sausages
J Hultman, R Rahkila, J Ali, J Rousu, KJ Björkroth
Applied and environmental microbiology 81 (20), 7088-7097, 2015
Taxonomically and functionally diverse microbial communities in deep crystalline rocks of the Fennoscandian shield
M Nyyssönen, J Hultman, L Ahonen, I Kukkonen, L Paulin, P Laine, ...
The ISME journal 8 (1), 126-138, 2014
Comparison of microbial communities in marinated and unmarinated broiler meat by metagenomics
TT Nieminen, K Koskinen, P Laine, J Hultman, E Säde, L Paulin, ...
International journal of food microbiology 157 (2), 142-149, 2012
FOAM (functional ontology assignments for metagenomes): a hidden Markov model (HMM) database with environmental focus
E Prestat, MM David, J Hultman, N Taş, R Lamendella, J Dvornik, ...
Nucleic acids research 42 (19), e145-e145, 2014
Metabolomics and bacterial diversity of packaged yellowfin tuna (Thunnus albacares) and salmon (Salmo salar) show fish species-specific spoilage development during chilled storage
E Jääskeläinen, LMA Jakobsen, J Hultman, N Eggers, HC Bertram, ...
International journal of food microbiology 293, 44-52, 2019
Development of spoilage bacterial community and volatile compounds in chilled beef under vacuum or high oxygen atmospheres
E Jääskeläinen, J Hultman, J Parshintsev, ML Riekkola, J Björkroth
International Journal of Food Microbiology 223, 25-32, 2016
Ecology determines how low antibiotic concentration impacts community composition and horizontal transfer of resistance genes
J Cairns, L Ruokolainen, J Hultman, M Tamminen, M Virta, T Hiltunen
Communications biology 1 (1), 35, 2018
Determination of fungal succession during municipal solid waste composting using a cloning‐based analysis
J Hultman, T Vasara, P Partanen, J Kurola, MH Kontro, L Paulin, ...
Journal of Applied Microbiology 108 (2), 472-487, 2010
Quantifying uncertainty of taxonomic placement in DNA barcoding and metabarcoding
P Somervuo, DW Yu, CCY Xu, Y Ji, J Hultman, H Wirta, O Ovaskainen
Methods in Ecology and Evolution 8 (4), 398-407, 2017
Exploring lot-to-lot variation in spoilage bacterial communities on commercial modified atmosphere packaged beef
E Säde, K Penttinen, J Björkroth, J Hultman
Food microbiology 62, 147-152, 2017
Molecular analysis of meso-and thermophilic microbiota associated with anaerobic biowaste degradation
J Ritari, K Koskinen, J Hultman, JM Kurola, M Kymäläinen, ...
BMC microbiology 12, 1-14, 2012
Evaluating the mobility potential of antibiotic resistance genes in environmental resistomes without metagenomics
K Pärnänen, A Karkman, M Tamminen, C Lyra, J Hultman, L Paulin, ...
Scientific reports 6 (1), 35790, 2016
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