| Declining coral calcification in massive Porites in two nearshore regions of the northern Great Barrier Reef TF Cooper, G De'Ath, KE Fabricius, JM Lough Global Change Biology 14 (3), 529-538, 2008 | 397 | 2008 |
| Bioindicators of changes in water quality on coral reefs: review and recommendations for monitoring programmes TF Cooper, JP Gilmour, KE Fabricius Coral reefs 28, 589-606, 2009 | 243 | 2009 |
| Disturbance gradients on inshore and offshore coral reefs caused by a severe tropical cyclone KE Fabricius, G De'Ath, ML Puotinen, T Done, TF Cooper, SC Burgess Limnology and Oceanography 53 (2), 690-704, 2008 | 224 | 2008 |
| The role of deep reefs in shallow reef recovery: an assessment of vertical connectivity in a brooding coral from west and east Australia MJH Van Oppen, PIM Bongaerts, JN Underwood, LM Peplow, TF Cooper Molecular ecology 20 (8), 1647-1660, 2011 | 205 | 2011 |
| New insights from coral growth band studies in an era of rapid environmental change JM Lough, TF Cooper Earth-Science Reviews 108 (3-4), 170-184, 2011 | 198 | 2011 |
| Growth of Western Australian corals in the Anthropocene TF Cooper, RA O’Leary, JM Lough Science 335 (6068), 593-596, 2012 | 171 | 2012 |
| Gradients in water column nutrients, sediment parameters, irradiance and coral reef development in the Whitsunday Region, central Great Barrier Reef TF Cooper, S Uthicke, C Humphrey, KE Fabricius Estuarine, Coastal and Shelf Science 74 (3), 458-470, 2007 | 170 | 2007 |
| A bioindicator system for water quality on inshore coral reefs of the Great Barrier Reef KE Fabricius, TF Cooper, C Humphrey, S Uthicke, G De’ath, J Davidson, ... Marine Pollution Bulletin 65 (4-9), 320-332, 2012 | 153 | 2012 |
| Effects of suspended sediments, dissolved inorganic nutrients and salinity on fertilisation and embryo development in the coral Acropora millepora (Ehrenberg, 1834) C Humphrey, M Weber, C Lott, T Cooper, K Fabricius Coral Reefs 27, 837-850, 2008 | 137 | 2008 |
| Niche specialization of reef-building corals in the mesophotic zone: metabolic trade-offs between divergent Symbiodinium types TF Cooper, KE Ulstrup, SS Dandan, AJ Heyward, M Kühl, A Muirhead, ... Proceedings of the Royal Society B: Biological Sciences 278 (1713), 1840-1850, 2011 | 133 | 2011 |
| Wet season fine sediment dynamics on the inner shelf of the Great Barrier Reef E Wolanski, KE Fabricius, TF Cooper, C Humphrey Estuarine, Coastal and Shelf Science 77 (4), 755-762, 2008 | 123 | 2008 |
| Environmental factors controlling the distribution of Symbiodinium harboured by the coral Acropora millepora on the Great Barrier Reef TF Cooper, R Berkelmans, KE Ulstrup, S Weeks, B Radford, AM Jones, ... PLoS One 6 (10), e25536, 2011 | 111 | 2011 |
| Temporal dynamics in coral bioindicators for water quality on coastal coral reefs of the Great Barrier Reef TF Cooper, PV Ridd, KE Ulstrup, C Humphrey, M Slivkoff, KE Fabricius Marine and Freshwater Research 59 (8), 703-716, 2008 | 101 | 2008 |
| Chronic exposure of corals to fine sediments: lethal and sub-lethal impacts F Flores, MO Hoogenboom, LD Smith, TF Cooper, D Abrego, AP Negri PloS one 7 (5), e37795, 2012 | 98 | 2012 |
| Symbiodinium genotypic and environmental controls on lipids in reef building corals TF Cooper, M Lai, KE Ulstrup, SM Saunders, GR Flematti, B Radford, ... PLoS One 6 (5), e20434, 2011 | 54 | 2011 |
| The influence of depth and a subsea pipeline on fish assemblages and commercially fished species T Bond, JC Partridge, MD Taylor, TF Cooper, DL McLean PLoS One 13 (11), e0207703, 2018 | 49 | 2018 |
| Fish-habitat associations in the region offshore from James Price Point-a rapid assessment using Baited Remote Underwater Video Stations (BRUVS) M Cappo, M Stowar, C Syms, C Johansson, T Cooper Journal of the Royal Society of Western Australia 94, 303-321, 2011 | 41 | 2011 |
| Mesoscale variation in the photophysiology of the reef building coral Pocillopora damicornis along an environmental gradient TF Cooper, KE Ulstrup Estuarine, Coastal and Shelf Science 83 (2), 186-196, 2009 | 32 | 2009 |
| Early warning indicators of change in the condition of corals and coral communities in response to key anthropogenic stressors in the Pilbara, Western Australia JP Gilmour, TF Cooper, KE Fabricius, LD Smith Australian Institute of Marine Science Report to the Environmental …, 2006 | 30 | 2006 |
| Environmental drivers of growth in massive Porites corals over 16 degrees of latitude along Australia's northwest shelf JM Lough, NE Cantin, JA Benthuysen, TF Cooper Limnology and Oceanography 61 (2), 684-700, 2016 | 29 | 2016 |
