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Ben J Woodcroft
Ben J Woodcroft
Microbial informatics group leader, Centre for Microbiome Research, QUT
Verified email at qut.edu.au - Homepage
Title
Cited by
Cited by
Year
Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life
DH Parks, C Rinke, M Chuvochina, PA Chaumeil, BJ Woodcroft, ...
Nature microbiology 2 (11), 1533-1542, 2017
15772017
The Amphimedon queenslandica genome and the evolution of animal complexity
M Srivastava, O Simakov, J Chapman, B Fahey, MEA Gauthier, T Mitros, ...
Nature 466 (7307), 720-726, 2010
11592010
Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
A Grimson, M Srivastava, B Fahey, BJ Woodcroft, HR Chiang, N King, ...
Nature 455 (7217), 1193-1197, 2008
8322008
Methylotrophic methanogenesis discovered in the archaeal phylum Verstraetearchaeota
I Vanwonterghem, PN Evans, DH Parks, PD Jensen, BJ Woodcroft, ...
Nature microbiology 1 (12), 1-9, 2016
5222016
An evolving view of methane metabolism in the Archaea
PN Evans, JA Boyd, AO Leu, BJ Woodcroft, DH Parks, P Hugenholtz, ...
Nature Reviews Microbiology 17 (4), 219-232, 2019
4462019
Methane dynamics regulated by microbial community response to permafrost thaw
CK McCalley, BJ Woodcroft, SB Hodgkins, RA Wehr, EH Kim, R Mondav, ...
Nature 514 (7523), 478-481, 2014
4102014
Host-linked soil viral ecology along a permafrost thaw gradient
JB Emerson, S Roux, JR Brum, B Bolduc, BJ Woodcroft, HB Jang, ...
Nature microbiology 3 (8), 870-880, 2018
4072018
Genome-centric view of carbon processing in thawing permafrost
BJ Woodcroft, CM Singleton, JA Boyd, PN Evans, JB Emerson, ...
Nature 560 (7716), 49-54, 2018
3642018
GroopM: an automated tool for the recovery of population genomes from related metagenomes
M Imelfort, D Parks, BJ Woodcroft, P Dennis, P Hugenholtz, GW Tyson
PeerJ 2, e603, 2014
3212014
Parallel evolution of nacre building gene sets in molluscs
DJ Jackson, C McDougall, B Woodcroft, P Moase, RA Rose, M Kube, ...
Molecular biology and evolution 27 (3), 591-608, 2010
2762010
Sequenceserver: a modern graphical user interface for custom BLAST databases
A Priyam, BJ Woodcroft, V Rai, I Moghul, A Munagala, F Ter, ...
Molecular biology and evolution 36 (12), 2922-2924, 2019
2552019
Soil viruses are underexplored players in ecosystem carbon processing
G Trubl, HB Jang, S Roux, JB Emerson, N Solonenko, DR Vik, L Solden, ...
MSystems 3 (5), 10.1128/msystems. 00076-18, 2018
2102018
Discovery of a novel methanogen prevalent in thawing permafrost
R Mondav, BJ Woodcroft, EH Kim, CK McCalley, SB Hodgkins, PM Crill, ...
Nature communications 5 (1), 3212, 2014
2072014
CheckM2: a rapid, scalable and accurate tool for assessing microbial genome quality using machine learning
A Chklovski, DH Parks, BJ Woodcroft, GW Tyson
Nature Methods 20 (8), 1203-1212, 2023
2062023
Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum
SC Oehring, BJ Woodcroft, S Moes, J Wetzel, O Dietz, A Pulfer, ...
Genome biology 13, 1-21, 2012
1642012
GraftM: a tool for scalable, phylogenetically informed classification of genes within metagenomes
JA Boyd, BJ Woodcroft, GW Tyson
Nucleic Acids Research 46 (10), e59-e59, 2018
1422018
Methanotrophy across a natural permafrost thaw environment
CM Singleton, CK McCalley, BJ Woodcroft, JA Boyd, PN Evans, ...
The ISME journal 12 (10), 2544-2558, 2018
1272018
Back from the dead; the curious tale of the predatory cyanobacterium Vampirovibrio chlorellavorus
RM Soo, BJ Woodcroft, DH Parks, GW Tyson, P Hugenholtz
PeerJ 3, e968, 2015
1062015
Drug target prediction and prioritization: using orthology to predict essentiality in parasite genomes
MA Doyle, RB Gasser, BJ Woodcroft, RS Hall, SA Ralph
BMC genomics 11, 1-14, 2010
912010
Validation of picogram-and femtogram-input DNA libraries for microscale metagenomics
C Rinke, S Low, BJ Woodcroft, JB Raina, A Skarshewski, XH Le, ...
PeerJ 4, e2486, 2016
832016
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Articles 1–20