Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life DH Parks, C Rinke, M Chuvochina, PA Chaumeil, BJ Woodcroft, ... Nature microbiology 2 (11), 1533-1542, 2017 | 1642 | 2017 |
The Amphimedon queenslandica genome and the evolution of animal complexity M Srivastava, O Simakov, J Chapman, B Fahey, MEA Gauthier, T Mitros, ... Nature 466 (7307), 720-726, 2010 | 1172 | 2010 |
Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals A Grimson, M Srivastava, B Fahey, BJ Woodcroft, HR Chiang, N King, ... Nature 455 (7217), 1193-1197, 2008 | 850 | 2008 |
Methylotrophic methanogenesis discovered in the archaeal phylum Verstraetearchaeota I Vanwonterghem, PN Evans, DH Parks, PD Jensen, BJ Woodcroft, ... Nature microbiology 1 (12), 1-9, 2016 | 540 | 2016 |
An evolving view of methane metabolism in the Archaea PN Evans, JA Boyd, AO Leu, BJ Woodcroft, DH Parks, P Hugenholtz, ... Nature Reviews Microbiology 17 (4), 219-232, 2019 | 472 | 2019 |
Host-linked soil viral ecology along a permafrost thaw gradient JB Emerson, S Roux, JR Brum, B Bolduc, BJ Woodcroft, HB Jang, ... Nature microbiology 3 (8), 870-880, 2018 | 441 | 2018 |
Methane dynamics regulated by microbial community response to permafrost thaw CK McCalley, BJ Woodcroft, SB Hodgkins, RA Wehr, EH Kim, R Mondav, ... Nature 514 (7523), 478-481, 2014 | 418 | 2014 |
Genome-centric view of carbon processing in thawing permafrost BJ Woodcroft, CM Singleton, JA Boyd, PN Evans, JB Emerson, ... Nature 560 (7716), 49-54, 2018 | 381 | 2018 |
GroopM: an automated tool for the recovery of population genomes from related metagenomes M Imelfort, D Parks, BJ Woodcroft, P Dennis, P Hugenholtz, GW Tyson PeerJ 2, e603, 2014 | 329 | 2014 |
Parallel evolution of nacre building gene sets in molluscs DJ Jackson, C McDougall, B Woodcroft, P Moase, RA Rose, M Kube, ... Molecular biology and evolution 27 (3), 591-608, 2010 | 277 | 2010 |
CheckM2: a rapid, scalable and accurate tool for assessing microbial genome quality using machine learning A Chklovski, DH Parks, BJ Woodcroft, GW Tyson Nature Methods 20 (8), 1203-1212, 2023 | 267 | 2023 |
Sequenceserver: a modern graphical user interface for custom BLAST databases A Priyam, BJ Woodcroft, V Rai, I Moghul, A Munagala, F Ter, ... Molecular biology and evolution 36 (12), 2922-2924, 2019 | 266 | 2019 |
Soil viruses are underexplored players in ecosystem carbon processing G Trubl, HB Jang, S Roux, JB Emerson, N Solonenko, DR Vik, L Solden, ... MSystems 3 (5), 10.1128/msystems. 00076-18, 2018 | 219 | 2018 |
Discovery of a novel methanogen prevalent in thawing permafrost R Mondav, BJ Woodcroft, EH Kim, CK McCalley, SB Hodgkins, PM Crill, ... Nature communications 5 (1), 3212, 2014 | 210 | 2014 |
Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum SC Oehring, BJ Woodcroft, S Moes, J Wetzel, O Dietz, A Pulfer, ... Genome biology 13, 1-21, 2012 | 167 | 2012 |
GraftM: a tool for scalable, phylogenetically informed classification of genes within metagenomes JA Boyd, BJ Woodcroft, GW Tyson Nucleic Acids Research 46 (10), e59-e59, 2018 | 146 | 2018 |
Methanotrophy across a natural permafrost thaw environment CM Singleton, CK McCalley, BJ Woodcroft, JA Boyd, PN Evans, ... The ISME journal 12 (10), 2544-2558, 2018 | 132 | 2018 |
Back from the dead; the curious tale of the predatory cyanobacterium Vampirovibrio chlorellavorus RM Soo, BJ Woodcroft, DH Parks, GW Tyson, P Hugenholtz PeerJ 3, e968, 2015 | 109 | 2015 |
Drug target prediction and prioritization: using orthology to predict essentiality in parasite genomes MA Doyle, RB Gasser, BJ Woodcroft, RS Hall, SA Ralph BMC genomics 11, 1-14, 2010 | 91 | 2010 |
Undinarchaeota illuminate DPANN phylogeny and the impact of gene transfer on archaeal evolution N Dombrowski, TA Williams, J Sun, BJ Woodcroft, JH Lee, BQ Minh, ... Nature Communications 11 (1), 3939, 2020 | 86 | 2020 |