| Integrated multi-omics of the human gut microbiome in a case study of familial type 1 diabetes A Heintz-Buschart, P May, CC Laczny, LA Lebrun, C Bellora, A Krishna, ... Nature microbiology 2 (1), 1-13, 2016 | 295 | 2016 |
| Colonization and succession within the human gut microbiome by archaea, bacteria, and microeukaryotes during the first year of life L Wampach, A Heintz-Buschart, A Hogan, EEL Muller, S Narayanasamy, ... Frontiers in microbiology 8, 738, 2017 | 272 | 2017 |
| VizBin-an application for reference-independent visualization and human-augmented binning of metagenomic data CC Laczny, T Sternal, V Plugaru, P Gawron, A Atashpendar, ... Microbiome 3, 1-7, 2015 | 228 | 2015 |
| IMP: a pipeline for reproducible reference-independent integrated metagenomic and metatranscriptomic analyses S Narayanasamy, Y Jarosz, EEL Muller, A Heintz-Buschart, M Herold, ... Genome biology 17, 1-21, 2016 | 140 | 2016 |
| PathoFact: a pipeline for the prediction of virulence factors and antimicrobial resistance genes in metagenomic data L De Nies, S Lopes, SB Busi, V Galata, A Heintz-Buschart, CC Laczny, ... Microbiome 9, 1-14, 2021 | 121 | 2021 |
| Comparative integrated omics: identification of key functionalities in microbial community-wide metabolic networks H Roume, A Heintz-Buschart, EEL Muller, P May, VP Satagopam, ... npj Biofilms and Microbiomes 1 (1), 1-11, 2015 | 98 | 2015 |
| BusyBee Web: metagenomic data analysis by bootstrapped supervised binning and annotation CC Laczny, C Kiefer, V Galata, T Fehlmann, C Backes, A Keller Nucleic acids research 45 (W1), W171-W179, 2017 | 86 | 2017 |
| Community-integrated omics links dominance of a microbial generalist to fine-tuned resource usage EEL Muller, N Pinel, CC Laczny, MR Hoopmann, S Narayanasamy, ... Nature communications 5 (1), 5603, 2014 | 84 | 2014 |
| Integration of time-series meta-omics data reveals how microbial ecosystems respond to disturbance M Herold, S Martínez Arbas, S Narayanasamy, AR Sheik, ... Nature communications 11 (1), 5281, 2020 | 81 | 2020 |
| Alignment-free visualization of metagenomic data by nonlinear dimension reduction CC Laczny, N Pinel, N Vlassis, P Wilmes Scientific reports 4 (1), 4516, 2014 | 73 | 2014 |
| Roles of bacteriophages, plasmids and CRISPR immunity in microbial community dynamics revealed using time-series integrated meta-omics S Martínez Arbas, S Narayanasamy, M Herold, LA Lebrun, ... Nature microbiology 6 (1), 123-135, 2021 | 59 | 2021 |
| miRTrail-a comprehensive webserver for analyzing gene and miRNA patterns to enhance the understanding of regulatory mechanisms in diseases C Laczny, P Leidinger, J Haas, N Ludwig, C Backes, A Gerasch, ... BMC bioinformatics 13, 1-13, 2012 | 55 | 2012 |
| Phenotypic differentiation of gastrointestinal microbes is reflected in their encoded metabolic repertoires E Bauer, CC Laczny, S Magnusdottir, P Wilmes, I Thiele Microbiome 3, 1-13, 2015 | 43 | 2015 |
| Integrated meta-omic analyses of the gastrointestinal tract microbiome in patients undergoing allogeneic hematopoietic stem cell transplantation A Kaysen, A Heintz-Buschart, EEL Muller, S Narayanasamy, L Wampach, ... Translational Research 186, 79-94. e1, 2017 | 42 | 2017 |
| Alterations of oral microbiota and impact on the gut microbiome in type 1 diabetes mellitus revealed by integrated multi-omic analyses BJ Kunath, O Hickl, P Queirós, C Martin-Gallausiaux, LA Lebrun, R Halder, ... Microbiome 10 (1), 243, 2022 | 32 | 2022 |
| Colonization and succession within the human gut microbiome by archaea, bacteria, and microeukaryotes during the first year of life. Front Microbiol 8: 738 L Wampach, A Heintz-Buschart, A Hogan, EEL Muller, S Narayanasamy, ... | 30 | 2017 |
| The gut microbiome molecular complex in human health and disease P Wilmes, C Martin-Gallausiaux, M Ostaszewski, VTE Aho, PV Novikova, ... Cell Host & Microbe 30 (9), 1201-1206, 2022 | 27 | 2022 |
| Assessing the heterogeneity of in silico plasmid predictions based on whole-genome-sequenced clinical isolates CC Laczny, V Galata, A Plum, AE Posch, A Keller Briefings in bioinformatics 20 (3), 857-865, 2019 | 24 | 2019 |
| Altered infective competence of the human gut microbiome in COVID-19 L de Nies, V Galata, C Martin-Gallausiaux, M Despotovic, SB Busi, ... Microbiome 11 (1), 46, 2023 | 20 | 2023 |
| PathoFact: a pipeline for the prediction of virulence factors and antimicrobial resistance genes in metagenomic data. Microbiome 9: 49 L De Nies, S Lopes, SB Busi, V Galata, A Heintz-Buschart, CC Laczny, ... | 19 | 2021 |
Paul WilmesProfessorVerified email at uni.lu
