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Magdy Alabady, PhD
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Widespread natural variation of DNA methylation within angiosperms
CE Niederhuth, AJ Bewick, L Ji, MS Alabady, KD Kim, Q Li, NA Rohr, ...
Genome biology 17, 1-19, 2016
4732016
Genetic mapping of new cotton fiber loci using EST-derived microsatellites in an interspecific recombinant inbred line cotton population
YH Park, MS Alabady, M Ulloa, B Sickler, TA Wilkins, J Yu, DM Stelly, ...
Molecular Genetics and Genomics 274, 428-441, 2005
2452005
Adapterama I: universal stubs and primers for 384 unique dual-indexed or 147,456 combinatorially-indexed Illumina libraries (iTru & iNext)
TC Glenn, RA Nilsen, TJ Kieran, JG Sanders, NJ Bayona-Vásquez, ...
PeerJ 7, e7755, 2019
2432019
Adapterama I: universal stubs and primers for thousands of dual-indexed Illumina libraries (iTru & iNext)
TC Glenn, RA Nilsen, TJ Kieran, JW Finger Jr, TW Pierson, KE Bentley, ...
BioRxiv, 049114, 2016
1172016
Genomic and small RNA sequencing of Miscanthus × giganteusshows the utility of sorghum as a reference genome sequence for Andropogoneae grasses
K Swaminathan, MS Alabady, K Varala, E De Paoli, I Ho, DS Rokhsar, ...
Genome biology 11, 1-18, 2010
1152010
A kinesin-14 motor activates neocentromeres to promote meiotic drive in maize
RK Dawe, EG Lowry, JI Gent, MC Stitzer, KW Swentowsky, DM Higgins, ...
Cell 173 (4), 839-850. e18, 2018
1122018
Gapless assembly of maize chromosomes using long-read technologies
J Liu, AS Seetharam, K Chougule, S Ou, KW Swentowsky, JI Gent, ...
Genome Biology 21, 1-17, 2020
992020
Histone H3 Variant Regulates RNA Polymerase II Transcription Termination and Dual Strand Transcription of siRNA Loci in Trypanosoma brucei
D Reynolds, BT Hofmeister, L Cliffe, M Alabady, TN Siegel, RJ Schmitz, ...
PLoS genetics 12 (1), e1005758, 2016
632016
Exploiting genome variation to improve next-generation sequencing data analysis and genome editing efficiency in Populus tremula × alba 717-1B4
LJ Xue, MS Alabady, M Mohebbi, CJ Tsai
Tree Genetics & Genomes 11, 1-8, 2015
512015
Gene-rich islands for fiber development in the cotton genome
Z Xu, RJ Kohel, G Song, J Cho, M Alabady, J Yu, P Koo, J Chu, S Yu, ...
Genomics 92 (3), 173-183, 2008
442008
A detailed gene expression study of the Miscanthusgenus reveals changes in the transcriptome associated with the rejuvenation of spring rhizomes
A Barling, K Swaminathan, T Mitros, BT James, J Morris, O Ngamboma, ...
BMC genomics 14, 1-16, 2013
402013
Adapterama I: universal stubs and primers for 384 unique dual-indexed or 147,456 combinatorially-indexed Illumina libraries (iTru & iNext). PeerJ 7: e7755
TC Glenn, RA Nilsen, TJ Kieran, JG Sanders, NJ Bayona-Vásquez, ...
362019
Characterizing changes in soil microbiome abundance and diversity due to different cover crop techniques
CH Wang, L Wu, Z Wang, MS Alabady, D Parson, Z Molumo, ...
PLoS One 15 (5), e0232453, 2020
342020
Abundance and multilocus sequence analysis of Vibrio bacteria associated with diseased elkhorn coral (Acropora palmata) of the Florida Keys
KM Kemp, JR Westrich, MS Alabady, ML Edwards, EK Lipp
Applied and environmental microbiology 84 (2), e01035-17, 2018
332018
Effects of the probiotic Lactobacillus animalis in murine Mycobacterium avium subspecies paratuberculosis infection
E Karunasena, PC Kurkure, RD Lackey, KW McMahon, EP Kiernan, ...
BMC microbiology 13, 1-13, 2013
282013
Double feature selection and cluster analyses in mining of microarray data from cotton
MS Alabady, E Youn, TA Wilkins
BMC genomics 9, 1-11, 2008
252008
Serum albumin alters the expression of iron-controlled genes in Pseudomonas aeruginosa
C Kruczek, M Wachtel, MS Alabady, PR Payton, JA Colmer-Hamood, ...
Microbiology 158 (2), 353-367, 2012
212012
Development of transcriptomic markers for population analysis using restriction site associated RNA sequencing (RARseq)
MS Alabady, WL Rogers, RL Malmberg
Plos one 10 (8), e0134855, 2015
92015
Genotypic Characterization of Pseudomonas aeruginosa Isolated from Human and Animal Sources in Egypt
KM Osman, MS Alabady, N Ata, NA Ezzeldin, MAK Aly
Zoonoses and public health 57 (5), 329-338, 2010
92010
Diet composition and diversity does not explain fewer, smaller urban nestlings
EE Grabarczyk, SA Gill, MJ Vonhof, MS Alabady, Z Wang, JM Schmidt
Plos one 17 (3), e0264381, 2022
62022
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Articles 1–20