| Supplementation of saturated long-chain fatty acids maintains intestinal eubiosis and reduces ethanol-induced liver injury in mice P Chen, M Torralba, J Tan, M Embree, K Zengler, P Stärkel, ... Gastroenterology 148 (1), 203-214. e16, 2015 | 323 | 2015 |
| Multi-omic data integration enables discovery of hidden biological regularities A Ebrahim, E Brunk, J Tan, EJ O'brien, D Kim, R Szubin, JA Lerman, ... Nature communications 7 (1), 1-9, 2016 | 171 | 2016 |
| Global transcriptional regulatory network for Escherichia coli robustly connects gene expression to transcription factor activities X Fang, A Sastry, N Mih, D Kim, J Tan, JT Yurkovich, CJ Lloyd, Y Gao, ... Proceedings of the National Academy of Sciences 114 (38), 10286-10291, 2017 | 111 | 2017 |
| Cellular responses to reactive oxygen species are predicted from molecular mechanisms L Yang, N Mih, A Anand, JH Park, J Tan, JT Yurkovich, JM Monk, CJ Lloyd, ... Proceedings of the National Academy of Sciences 116 (28), 14368-14373, 2019 | 101 | 2019 |
| Unraveling interactions in microbial communities-from co-cultures to microbiomes J Tan, C Zuniga, K Zengler Journal of Microbiology 53 (5), 295-305, 2015 | 75 | 2015 |
| Caveolae in ventricular myocytes are required for stretch-dependent conduction slowing ER Pfeiffer, AT Wright, AG Edwards, JC Stowe, K McNall, J Tan, ... Journal of molecular and cellular cardiology 76, 265-274, 2014 | 58 | 2014 |
| A streamlined ribosome profiling protocol for the characterization of microorganisms H Latif, R Szubin, J Tan, E Brunk, A Lechner, K Zengler, BO Palsson Biotechniques 58 (6), 329-332, 2015 | 48 | 2015 |
| Independent component analysis of E. coli's transcriptome reveals the cellular processes that respond to heterologous gene expression J Tan, AV Sastry, KS Fremming, SP Bjørn, A Hoffmeyer, S Seo, ... Metabolic Engineering 61, 360-368, 2020 | 47 | 2020 |
| Systems biology definition of the core proteome of metabolism and expression is consistent with high-throughput data L Yang, J Tan, EJ O’Brien, JM Monk, D Kim, HJ Li, P Charusanti, ... Proceedings of the National Academy of Sciences 112 (34), 10810-10815, 2015 | 46 | 2015 |
| Evaluation of rate law approximations in bottom-up kinetic models of metabolism B Du, DC Zielinski, ES Kavvas, A Dräger, J Tan, Z Zhang, KE Ruggiero, ... BMC systems biology 10 (1), 1-15, 2016 | 39 | 2016 |
| Causal mutations from adaptive laboratory evolution are outlined by multiple scales of genome annotations and condition-specificity PV Phaneuf, JT Yurkovich, D Heckmann, M Wu, TE Sandberg, ZA King, ... BMC genomics 21 (1), 1-16, 2020 | 25 | 2020 |
| Laboratory evolution, transcriptomics, and modeling reveal mechanisms of paraquat tolerance K Rychel, J Tan, A Patel, C Lamoureux, Y Hefner, R Szubin, J Johnsen, ... Cell Reports 42 (9), 2023 | 11 | 2023 |
| The importance of protein phosphorylation for signaling and metabolism in response to diel light cycling and nutrient availability in a marine diatom MH Tan, SR Smith, KK Hixson, J Tan, JK McCarthy, AB Kustka, AE Allen Biology 9 (7), 155, 2020 | 10 | 2020 |
| Lab evolution, transcriptomics, and modeling reveal mechanisms of paraquat tolerance K Rychel, J Tan, A Patel, C Lamoureux, Y Hefner, R Szubin, J Johnsen, ... bioRxiv, 2022.12. 20.521246, 2022 | 5 | 2022 |
| Experimental evolution reveals the genetic basis and systems biology of superoxide stress tolerance J Tan, CA Olson, JH Park, AV Sastry, P Phaneuf, L Yang, R Szubin, ... bioRxiv, 749887, 2019 | 2 | 2019 |
| Cellular responses to reactive oxygen species can be predicted on multiple biological scales from molecular mechanisms L Yang, N Mih, A Anand, JH Park, J Tan, JT Yurkovich, JM Monk, CJ Lloyd, ... BioRxiv, 227892, 2018 | 2 | 2018 |
| Multi-scale model of the proteomic and metabolic consequences of reactive oxygen species L Yang, N Mih, JT Yurkovich, JH Park, S Seo, D Kim, JM Monk, CJ Lloyd, ... bioRxiv, 227892, 2017 | 2 | 2017 |
| Myocyte Stretch Slows Cardiac Conduction by a Caveolae-Dependent Increase in Sarcolemmal Capacitance E Pfeiffer, A Wright, A Edwards, J Stowe, K McNall, J Tan, H Patel, ... Biophysical Journal 106 (2), 630a, 2014 | | 2014 |
| Cardiomyocyte Geometry and Stretch Effects on Longitudinal Conduction Velocity E Pfeiffer, J Stowe, J Tan, A McCulloch The FASEB Journal 26, 1053.8-1053.8, 2012 | | 2012 |
