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Brian Oakley
Brian Oakley
Professor, College of Veterinary Medicine, Western University of Health Sciences, Pomona, CA
Verified email at westernu.edu - Homepage
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Cited by
Year
Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities
PD Schloss, SL Westcott, T Ryabin, JR Hall, M Hartmann, EB Hollister, ...
Applied and environmental microbiology 75 (23), 7537-7541, 2009
204682009
Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean
CA Francis, KJ Roberts, JM Beman, AE Santoro, BB Oakley
Proceedings of the National Academy of Sciences 102 (41), 14683-14688, 2005
25812005
The chicken gastrointestinal microbiome
BB Oakley, HS Lillehoj, MH Kogut, WK Kim, JJ Maurer, A Pedroso, ...
FEMS microbiology letters 360 (2), 100-112, 2014
6972014
Targeted PCR for detection of vaginal bacteria associated with bacterial vaginosis
DN Fredricks, TL Fiedler, KK Thomas, BB Oakley, JM Marrazzo
Journal of clinical microbiology 45 (10), 3270-3276, 2007
5342007
Chicken gut microbiota: importance and detection technology
Y Shang, S Kumar, B Oakley, WK Kim
Frontiers in veterinary science 5, 254, 2018
3702018
Diversity of human vaginal bacterial communities and associations with clinically defined bacterial vaginosis
BB Oakley, TL Fiedler, JM Marrazzo, DN Fredricks
Applied and environmental microbiology 74 (15), 4898-4909, 2008
3472008
Diazotrophic endophytes of native black cottonwood and willow
SL Doty, B Oakley, G Xin, JW Kang, G Singleton, Z Khan, A Vajzovic, ...
Symbiosis 47, 23-33, 2009
2592009
Spatial variability in microclimate in a mixed-conifer forest before and after thinning and burning treatments
S Ma, A Concilio, B Oakley, M North, J Chen
Forest Ecology and Management 259 (5), 904-915, 2010
2302010
Spatial and temporal changes in the broiler chicken cecal and fecal microbiomes and correlations of bacterial taxa with cytokine gene expression
BB Oakley, MH Kogut
Frontiers in veterinary science 3, 11, 2016
2192016
Inferring the evolutionary history of the plant pathogen Pseudomonas syringae from its biogeography in headwaters of rivers in North America, Europe, and New Zealand
CE Morris, DC Sands, JL Vanneste, J Montarry, B Oakley, C Guilbaud, ...
MBio 1 (3), 10.1128/mbio. 00107-10, 2010
1582010
Successional changes in the chicken cecal microbiome during 42 days of growth are independent of organic acid feed additives
BB Oakley, RJ Buhr, CW Ritz, BH Kiepper, ME Berrang, BS Seal, NA Cox
BMC veterinary research 10, 1-8, 2014
1532014
Forest stand structure and pattern of old-growth western hemlock/Douglas-fir and mixed-conifer forests
M North, J Chen, B Oakley, B Song, M Rudnicki, A Gray, J Innes
Forest Science 50 (3), 299-311, 2004
1532004
The poultry-associated microbiome: network analysis and farm-to-fork characterizations
BB Oakley, CA Morales, J Line, ME Berrang, RJ Meinersmann, ...
PloS one 8 (2), e57190, 2013
1492013
Characterizing relationships among fecal indicator bacteria, microbial source tracking markers, and associated waterborne pathogen occurrence in stream water and sediments in a …
JK Bradshaw, BJ Snyder, A Oladeinde, D Spidle, ME Berrang, ...
Water research 101, 498-509, 2016
1432016
Influence of light and soil moisture on Sierran mixed-conifer understory communities
M North, B Oakley, R Fiegener, A Gray, M Barbour
Plant Ecology 177, 13-24, 2005
1422005
Free-living and aggregate-associated Planctomycetes in the Black Sea
CA Fuchsman, JT Staley, BB Oakley, JB Kirkpatrick, JW Murray
FEMS Microbiology Ecology 80 (2), 402-416, 2012
1292012
Analysis of nitrite reductase (nirK and nirS) genes and cultivation reveal depauperate community of denitrifying bacteria in the Black Sea suboxic zone
BB Oakley, CA Francis, KJ Roberts, CA Fuchsman, S Srinivasan, ...
Environmental microbiology 9 (1), 118-130, 2007
1152007
Vegetation and ecological characteristics of mixed-conifer and red fir forests at the Teakettle Experimental Forest
MP North
US Department of Agriculture, Forest Service, Pacific Southwest Research Station, 2002
1072002
Diversity and Distribution of Planctomycetes and Related Bacteria in the Suboxic Zone of the Black Sea
J Kirkpatrick, B Oakley, C Fuchsman, S Srinivasan, JT Staley, JW Murray
Applied and Environmental Microbiology 72 (4), 3079-3083, 2006
1032006
Can probiotics improve the environmental microbiome and resistome of commercial poultry production?
AA Pedroso, AL Hurley-Bacon, AS Zedek, TW Kwan, APO Jordan, ...
International journal of environmental research and public health 10 (10 …, 2013
752013
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