Istvan Simon
Istvan Simon
Institute of Enzymology, RCNS, Hungarian Academy of Sciences, Budapest HUNGARY
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IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content
Z Dosztányi, V Csizmok, P Tompa, I Simon
Bioinformatics 21 (16), 3433-3434, 2005
The HMMTOP transmembrane topology prediction server
GE Tusnady, I Simon
Bioinformatics 17 (9), 849-850, 2001
Principles governing amino acid composition of integral membrane proteins: application to topology prediction
GE Tusnady, I Simon
Journal of molecular biology 283 (2), 489-506, 1998
Prediction of transmembrane alpha-helices in prokaryotic membrane proteins: the dense alignment surface method.
M Cserzö, E Wallin, I Simon, G von Heijne, A Elofsson
Protein engineering 10 (6), 673-676, 1997
The pairwise energy content estimated from amino acid composition discriminates between folded and intrinsically unstructured proteins
Z Dosztanyi, V Csizmok, P Tompa, I Simon
Journal of molecular biology 347 (4), 827-839, 2005
ANCHOR: web server for predicting protein binding regions in disordered proteins
Z Dosztányi, B Mészáros, I Simon
Bioinformatics 25 (20), 2745-2746, 2009
Prediction of protein binding regions in disordered proteins
B Mészáros, I Simon, Z Dosztányi
PLoS computational biology 5 (5), e1000376, 2009
Preformed structural elements feature in partner recognition by intrinsically unstructured proteins
M Fuxreiter, I Simon, P Friedrich, P Tompa
Journal of molecular biology 338 (5), 1015-1026, 2004
PSORT-B: Improving protein subcellular localization prediction for Gram-negative bacteria
JL Gardy, C Spencer, K Wang, M Ester, GE Tusnady, I Simon, S Hua, ...
Nucleic acids research 31 (13), 3613-3617, 2003
Local structural disorder imparts plasticity on linear motifs
M Fuxreiter, P Tompa, I Simon
Bioinformatics 23 (8), 950-956, 2007
Hydrogen exchange and the dynamic structure of proteins
C Woodward, I Simon, E Tüchsen
Molecular and cellular biochemistry 48, 135-160, 1982
Disorder and sequence repeats in hub proteins and their implications for network evolution.
Z Dosztányi, J Chen, AK Dunker, I Simon, P Tompa
J. Proteome Res 5, 2985, 2006
PDB_TM: selection and membrane localization of transmembrane proteins in the protein data bank
GE Tusnády, Z Dosztányi, I Simon
Nucleic acids research 33 (suppl 1), D275-D278, 2005
Molecular principles of the interactions of disordered proteins
B Mészáros, P Tompa, I Simon, Z Dosztányi
Journal of molecular biology 372 (2), 549-561, 2007
PDBTM: Protein Data Bank of transmembrane proteins after 8 years
D Kozma, I Simon, GE Tusnady
Nucleic acids research 41 (D1), D524-D529, 2013
Transmembrane proteins in the Protein Data Bank: identification and classification
GE Tusnády, Z Dosztányi, I Simon
Bioinformatics 20 (17), 2964-2972, 2004
Close encounters of the third kind: disordered domains and the interactions of proteins
P Tompa, M Fuxreiter, CJ Oldfield, I Simon, AK Dunker, VN Uversky
Bioessays 31 (3), 328-335, 2009
Malleable machines take shape in eukaryotic transcriptional regulation
M Fuxreiter, P Tompa, I Simon, VN Uversky, JC Hansen, FJ Asturias
Nature chemical biology 4 (12), 728-737, 2008
BiSearch: primer-design and search tool for PCR on bisulfite-treated genomes
GE Tusnady, I Simon, A Varadi, T Aranyi
Nucleic acids research 33 (1), e9-e9, 2005
Stabilization centers in proteins: identification, characterization and predictions
Z Dosztányi, A Fiser, I Simon
Journal of molecular biology 272 (4), 597-612, 1997
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