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Julian Damashek
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Microbial nitrogen cycling in estuaries: From genes to ecosystem processes
J Damashek, CA Francis
Estuaries and Coasts 41 (3), 626-660, 2018
1412018
Variable nitrification rates across environmental gradients in turbid, nutrient-rich estuary waters of San Francisco Bay
J Damashek, KL Casciotti, CA Francis
Estuaries and Coasts 39 (4), 1050-1071, 2016
852016
Factors influencing nitrification rates and the abundance and transcriptional activity of ammonia‐oxidizing microorganisms in the dark northeast Pacific Ocean
JM Smith, J Damashek, FP Chavez, CA Francis
Limnology and Oceanography 61 (2), 596-609, 2016
762016
Benthic ammonia oxidizers differ in community structure and biogeochemical potential across a riverine delta
J Damashek, JM Smith, AC Mosier, CA Francis
Frontiers in Microbiology 5, 743, 2015
432015
Out of America to Africa or Asia: Inference of dispersal histories using nuclear and plastid DNA and the S-RNase self-incompatibility locus
JS Miller, A Kamath, J Damashek, RA Levin
Molecular Biology and Evolution 28 (1), 793-801, 2011
352011
Non-point source fecal contamination from aging wastewater infrastructure is a primary driver of antibiotic resistance in surface waters
J Damashek, JR Westrich, JMB McDonald, ME Teachey, CR Jackson, ...
Water Research 222, 118853, 2022
282022
Microbial oxidation of nitrogen supplied as selected organic nitrogen compounds in the South Atlantic Bight
J Damashek, BB Tolar, Q Liu, AO Okotie‐Oyekan, NJ Wallsgrove, ...
Limnology and Oceanography 64 (3), 982-995, 2019
262019
Indigenous arsenic (V)‐reducing microbial communities in redox‐fluctuating near‐surface sediments of the Mekong Delta
SC Ying, J Damashek, S Fendorf, CA Francis
Geobiology 13 (6), 581-587, 2015
222015
In-depth spatiotemporal characterization of planktonic archaeal and bacterial communities in North and South San Francisco Bay
AN Rasmussen, J Damashek, EA Eloe-Fadrosh, CA Francis
Microbial Ecology 81 (3), 601-616, 2021
162021
Regional patterns in ammonia-oxidizing communities throughout Chukchi Sea waters from the Bering Strait to the Beaufort Sea
J Damashek, KP Pettie, ZW Brown, MM Mills, KR Arrigo, CA Francis
Aquatic Microbial Ecology 79 (3), 273-286, 2017
132017
Coastal ocean metagenomes and curated metagenome-assembled genomes from Marsh Landing, Sapelo Island (Georgia, USA)
J Damashek, CF Edwardson, BB Tolar, SM Gifford, MA Moran, ...
Microbiology Resource Announcements 8 (40), e00934-19, 2019
72019
Transcriptional activity differentiates families of Marine Group II Euryarchaeota in the coastal ocean
J Damashek, AO Okotie-Oyekan, SM Gifford, A Vorobev, MA Moran, ...
ISME Communications 1, 5, 2021
62021
Limited accessibility of nitrogen supplied as amino acids, amides, and amines as energy sources for marine Thaumarchaeota
J Damashek, B Bayer, GJ Herndl, NJ Wallsgrove, T Allen, BN Popp, ...
bioRxiv, 2021.07. 22.453390, 2021
52021
Distribution of antibiotic resistance in a mixed-use watershed and the impact of wastewater treatment plants on antibiotic resistance in surface water
S Cho, LM Hiott, QD Read, J Damashek, J Westrich, M Edwards, RF Seim, ...
Antibiotics 12 (11), 1586, 2023
32023
Nitrification in a nutrient-rich urban estuary: regional and temporal variations in the microbial ecology and biogeochemical activity of ammonia oxidizers in San Francisco Bay
J Damashek
Stanford University, 2016
12016
Contribution of urea to nitrite production in Southern Ocean waters with contrasting nitrifying communities
JT Hollibaugh, A Okotie-Oyekan, J Damashek, H Ducklow, B Popp, ...
bioRxiv, 2024.02. 20.581251, 2024
2024
Substrate pulses as a selection factor for clades of marine Thaumarchaeota
J Hollibaugh, J Damashek, H Ducklow, B Popp, N Wallsgrove
2023
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