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Rute R da Fonseca
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Whole-genome analyses resolve early branches in the tree of life of modern birds
ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ...
Science 346 (6215), 1320-1331, 2014
19692014
Comparative genomics reveals insights into avian genome evolution and adaptation
G Zhang, C Li, Q Li, B Li, DM Larkin, C Lee, JF Storz, A Antunes, ...
Science 346 (6215), 1311-1320, 2014
10762014
Patterns of positive selection in six mammalian genomes
C Kosiol, T Vinař, RR da Fonseca, MJ Hubisz, CD Bustamante, R Nielsen, ...
PLoS genetics 4 (8), e1000144, 2008
6352008
The adaptive evolution of the mammalian mitochondrial genome
RR Da Fonseca, WE Johnson, SJ O'Brien, MJ Ramos, A Antunes
BMC genomics 9, 1-22, 2008
4312008
Large-scale ruminant genome sequencing provides insights into their evolution and distinct traits
L Chen, Q Qiu, YU Jiang, K Wang, Z Lin, Z Li, F Bibi, Y Yang, J Wang, ...
Science 364 (6446), eaav6202, 2019
3492019
Dense sampling of bird diversity increases power of comparative genomics
S Feng, J Stiller, Y Deng, J Armstrong, QI Fang, AH Reeve, D Xie, G Chen, ...
Nature 587 (7833), 252-257, 2020
3402020
Proteomic analysis of a pleistocene mammoth femur reveals more than one hundred ancient bone proteins
E Cappellini, LJ Jensen, D Szklarczyk, A Ginolhac, RAR da Fonseca, ...
Journal of proteome research 11 (2), 917-926, 2012
2482012
Next-generation biology: sequencing and data analysis approaches for non-model organisms
RR da Fonseca, A Albrechtsen, GE Themudo, J Ramos-Madrigal, ...
Marine genomics 30, 3-13, 2016
2072016
The origin and evolution of maize in the Southwestern United States
RR Da Fonseca, BD Smith, N Wales, E Cappellini, P Skoglund, ...
Nature plants 1 (1), 1-5, 2015
1832015
Cephalopods in neuroscience: regulations, research and the 3Rs
G Fiorito, A Affuso, DB Anderson, J Basil, L Bonnaud, G Botta, A Cole, ...
Invertebrate Neuroscience 14, 13-36, 2014
1632014
Ancient genomics
C Der Sarkissian, ME Allentoft, MC Ávila-Arcos, R Barnett, PF Campos, ...
Philosophical Transactions of the Royal Society B: Biological Sciences 370 …, 2015
1592015
Natural selection shaped the rise and fall of passenger pigeon genomic diversity
GGR Murray, AER Soares, BJ Novak, NK Schaefer, JA Cahill, AJ Baker, ...
Science 358 (6365), 951-954, 2017
1362017
Positive selection on the killer whale mitogenome
AD Foote, PA Morin, JW Durban, RL Pitman, P Wade, E Willerslev, ...
Biology letters 7 (1), 116-118, 2011
1362011
Molecular clocks indicate turnover and diversification of modern coleoid cephalopods during the Mesozoic Marine Revolution
AR Tanner, D Fuchs, IE Winkelmann, MTP Gilbert, MS Pankey, ...
Proceedings of the Royal Society B: Biological Sciences 284 (1850), 20162818, 2017
1332017
Analysis of complete mitochondrial genomes from extinct and extant rhinoceroses reveals lack of phylogenetic resolution
E Willerslev, MTP Gilbert, J Binladen, SYW Ho, PF Campos, A Ratan, ...
BMC evolutionary biology 9, 1-11, 2009
1312009
The elusive nature of adaptive mitochondrial DNA evolution of an arctic lineage prone to frequent introgression
J Melo-Ferreira, J Vilela, MM Fonseca, RR da Fonseca, P Boursot, ...
Genome biology and evolution 6 (4), 886-896, 2014
1052014
Molecular evolution and the role of oxidative stress in the expansion and functional diversification of cytosolic glutathione transferases
RR da Fonseca, WE Johnson, SJ O'Brien, V Vasconcelos, A Antunes
BMC evolutionary biology 10, 1-11, 2010
952010
Phylogenomic analyses data of the avian phylogenomics project
ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ...
GigaScience 4 (1), s13742-014-0038-1, 2015
902015
Comparative genomics provides insights into the aquatic adaptations of mammals
Y Yuan, Y Zhang, P Zhang, C Liu, J Wang, H Gao, AR Hoelzel, I Seim, ...
Proceedings of the National Academy of Sciences 118 (37), e2106080118, 2021
872021
Declining genetic diversity of European honeybees along the twentieth century
G Espregueira Themudo, A Rey-Iglesia, L Robles Tascón, ...
Scientific reports 10 (1), 10520, 2020
672020
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