| Molecular ecological network analyses Y Deng, YH Jiang, Y Yang, Z He, F Luo, J Zhou BMC bioinformatics 13, 1-20, 2012 | 2376 | 2012 |
| Climate warming enhances microbial network complexity and stability MM Yuan, X Guo, L Wu, YA Zhang, N Xiao, D Ning, Z Shi, X Zhou, L Wu, ... Nature Climate Change 11 (4), 343-348, 2021 | 1067 | 2021 |
| Phylogenetic Molecular Ecological Network of Soil Microbial Communities in Response to Elevated CO2 J Zhou, Y Deng, F Luo, Z He, Y Yang MBio 2 (4), 10.1128/mbio. 00122-11, 2011 | 829 | 2011 |
| Stochasticity, succession, and environmental perturbations in a fluidic ecosystem J Zhou, YE Deng, P Zhang, K Xue, Y Liang, JD Van Nostrand, Y Yang, ... Proceedings of the National Academy of Sciences 111 (9), E836-E845, 2014 | 736 | 2014 |
| Balance between community assembly processes mediates species coexistence in agricultural soil microbiomes across eastern China S Jiao, Y Yang, Y Xu, J Zhang, Y Lu The ISME Journal 14 (1), 202-216, 2020 | 678 | 2020 |
| A quantitative framework reveals ecological drivers of grassland microbial community assembly in response to warming D Ning, M Yuan, L Wu, Y Zhang, X Guo, X Zhou, Y Yang, AP Arkin, ... Nature communications 11 (1), 4717, 2020 | 675 | 2020 |
| Global diversity and biogeography of bacterial communities in wastewater treatment plants L Wu, D Ning, B Zhang, Y Li, P Zhang, X Shan, Q Zhang, MR Brown, Z Li, ... Nature microbiology 4 (7), 1183-1195, 2019 | 643 | 2019 |
| Temperature mediates continental-scale diversity of microbes in forest soils J Zhou, YE Deng, L Shen, C Wen, Q Yan, D Ning, Y Qin, K Xue, L Wu, ... Nature communications 7 (1), 12083, 2016 | 595 | 2016 |
| Reproducibility and quantitation of amplicon sequencing-based detection J Zhou, L Wu, Y Deng, X Zhi, YH Jiang, Q Tu, J Xie, JD Van Nostrand, ... The ISME journal 5 (8), 1303-1313, 2011 | 463 | 2011 |
| High-throughput metagenomic technologies for complex microbial community analysis: open and closed formats J Zhou, Z He, Y Yang, Y Deng, SG Tringe, L Alvarez-Cohen MBio 6 (1), 10.1128/mbio. 02288-14, 2015 | 425 | 2015 |
| Network succession reveals the importance of competition in response to emulsified vegetable oil amendment for uranium bioremediation Y Deng, P Zhang, Y Qin, Q Tu, Y Yang, Z He, CW Schadt, J Zhou Environmental Microbiology 18 (1), 205-218, 2016 | 394 | 2016 |
| Metabolic engineering of Clostridium cellulolyticum for production of isobutanol from cellulose W Higashide, Y Li, Y Yang, JC Liao Applied and environmental microbiology 77 (8), 2727-2733, 2011 | 344 | 2011 |
| Stochastic assembly leads to alternative communities with distinct functions in a bioreactor microbial community J Zhou, W Liu, Y Deng, YH Jiang, K Xue, Z He, JD Van Nostrand, L Wu, ... MBio 4 (2), 10.1128/mbio. 00584-12, 2013 | 327 | 2013 |
| The microbial gene diversity along an elevation gradient of the Tibetan grassland Y Yang, Y Gao, S Wang, D Xu, H Yu, L Wu, Q Lin, Y Hu, X Li, Z He, ... The ISME journal 8 (2), 430-440, 2014 | 309 | 2014 |
| Climate warming leads to divergent succession of grassland microbial communities X Guo, J Feng, Z Shi, X Zhou, M Yuan, X Tao, L Hale, T Yuan, J Wang, ... Nature Climate Change 8 (9), 813-818, 2018 | 308 | 2018 |
| Constructing gene co-expression networks and predicting functions of unknown genes by random matrix theory F Luo, Y Yang, J Zhong, H Gao, L Khan, DK Thompson, J Zhou BMC bioinformatics 8, 1-17, 2007 | 300 | 2007 |
| Responses of the functional structure of soil microbial community to livestock grazing in the T ibetan alpine grassland Y Yang, L Wu, Q Lin, M Yuan, D Xu, H Yu, Y Hu, J Duan, X Li, Z He, K Xue, ... Global change biology 19 (2), 637-648, 2013 | 296 | 2013 |
| Small and mighty: adaptation of superphylum Patescibacteria to groundwater environment drives their genome simplicity R Tian, D Ning, Z He, P Zhang, SJ Spencer, S Gao, W Shi, L Wu, Y Zhang, ... Microbiome 8, 1-15, 2020 | 289 | 2020 |
| Application of random matrix theory to biological networks F Luo, J Zhong, Y Yang, RH Scheuermann, J Zhou Physics Letters A 357 (6), 420-423, 2006 | 226 | 2006 |
| Modular organization of protein interaction networks F Luo, Y Yang, CF Chen, R Chang, J Zhou, RH Scheuermann Bioinformatics 23 (2), 207-214, 2007 | 223 | 2007 |
