| Improved software detection and extraction of ITS1 and ITS 2 from ribosomal ITS sequences of fungi and other eukaryotes for analysis of environmental sequencing data J Bengtsson‐Palme, M Ryberg, M Hartmann, S Branco, Z Wang, A Godhe, ... Methods in ecology and evolution 4 (10), 914-919, 2013 | 1224 | 2013 |
| A comprehensive, automatically updated fungal ITS sequence dataset for reference-based chimera control in environmental sequencing efforts RH Nilsson, L Tedersoo, M Ryberg, E Kristiansson, M Hartmann, ... Microbes and environments 30 (2), 145-150, 2015 | 263 | 2015 |
| Improving ITS sequence data for identification of plant pathogenic fungi RH Nilsson, KD Hyde, J Pawłowska, M Ryberg, L Tedersoo, AB Aas, ... Fungal Diversity 67, 11-19, 2014 | 179 | 2014 |
| Nuclear protein phylogenies support the monophyly of the three bryophyte groups (Bryophyta Schimp.) F de Sousa, PG Foster, PCJ Donoghue, H Schneider, CJ Cox New Phytologist 222 (1), 565-575, 2019 | 109 | 2019 |
| Phylogenetic Properties of 50 Nuclear Loci in Medicago (Leguminosae) Generated Using Multiplexed Sequence Capture and Next-Generation Sequencing F de Sousa, YJK Bertrand, S Nylinder, B Oxelman, JS Eriksson, BE Pfeil PloS one 9 (10), e109704, 2014 | 64 | 2014 |
| Assignment of Homoeologs to Parental Genomes in Allopolyploids for Species Tree Inference, with an Example from Fumaria (Papaveraceae) YJK Bertrand, AC Scheen, T Marcussen, BE Pfeil, F de Sousa, B Oxelman Systematic Biology 64 (3), 448-471, 2015 | 35 | 2015 |
| Allele phasing is critical to revealing a shared allopolyploid origin of Medicago arborea and M. strasseri (Fabaceae) JS Eriksson, F Sousa, YJK Bertrand, A Antonelli, B Oxelman, BE Pfeil BMC Evolutionary Biology 18, 2018 | 32 | 2018 |
| Patterns of phylogenetic incongruence in Medicago found among six loci F de Sousa, YJK Bertrand, BE Pfeil Plant Systematics and Evolution 302, 493-513, 2016 | 25 | 2016 |
| The chloroplast land plant phylogeny: analyses employing better-fitting tree-and site-heterogeneous composition models F Sousa, P Civáň, PG Foster, CJ Cox Frontiers in plant science 11, 536375, 2020 | 23 | 2020 |
| The mitochondrial phylogeny of land plants shows support for Setaphyta under composition-heterogeneous substitution models F Sousa, P Civáň, J Brazão, PG Foster, CJ Cox PeerJ 8, e8995, 2020 | 20 | 2020 |
| A cryptic species produced by autopolyploidy and subsequent introgression involving Medicago prostrata (Fabaceae) JS Eriksson, JL Blanco-Pastor, F Sousa, YJK Bertrand, BE Pfeil Molecular Phylogenetics and Evolution 107, 367-381, 2017 | 19 | 2017 |
| The use of chloroplast genome sequences to solve phylogenetic incongruences in Polystachya Hook (Orchidaceae Juss) NL de Abreu, RJV Alves, SRS Cardoso, YJK Bertrand, F Sousa, CF Hall, ... PeerJ 6, e4916, 2018 | 16 | 2018 |
| Using Genomic Location and Coalescent Simulation to Investigate Gene Tree Discordance in Medicago L. F Sousa, YJK Bertrand, JJ Doyle, B Oxelman, BE Pfeil Systematic Biology 66 (6), 934-949, 2017 | 12 | 2017 |
| A revision of the South American genus Apuleia (Leguminosae, Cassieae) FPST de Sousa, GP Lewis, JA Hawkins Kew Bulletin 65, 225-232, 2010 | 11 | 2010 |
| Increased evolutionary rates and conserved transcriptional response following allopolyploidization in brown algae F Sousa, J Neiva, N Martins, R Jacinto, L Anderson, PT Raimondi, ... Evolution 73 (1), 59-72, 2019 | 10 | 2019 |
| Population structure in Quercus suber L. revealed by nuclear microsatellite markers F Sousa, J Costa, C Ribeiro, M Varandas, F Pina-Martins, F Simões, ... PeerJ 10, e13565, 2022 | 5 | 2022 |
| The genus Cyphostemma (Planch.) Alston (Vitaceae) in Angola F De Sousa, E Figueiredo, GF Smith Bradleya 2011 (29), 79-92, 2011 | 4 | 2011 |
| Cyphostemma mendesii (Vitaceae), a new species from Angola F De Sousa, E Figueiredo, GF Smith Phytotaxa 7 (1), 35-39, 2010 | 4 | 2010 |
| A low‐latitude species pump: Peripheral isolation, parapatric speciation and mating‐system evolution converge in a marine radiation SC Almeida, J Neiva, F Sousa, N Martins, CJ Cox, J Melo‐Ferreira, ... Molecular Ecology 31 (18), 4797-4817, 2022 | 3 | 2022 |
| Next-generation molecular systematics and evolution: insights into Medicago F Sousa | 3 | 2015 |
