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James Galagan
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Initial sequencing and analysis of the human genome
US DOE Joint Genome Institute: Hawkins Trevor 4 Branscomb Elbert 4 Predki ...
nature 409 (6822), 860-921, 2001
306392001
The genome sequence of the filamentous fungus Neurospora crassa
JE Galagan, SE Calvo, KA Borkovich, EU Selker, ND Read, D Jaffe, ...
Nature 422 (6934), 859-868, 2003
19992003
The genome sequence of the rice blast fungus Magnaporthe grisea
RA Dean, NJ Talbot, DJ Ebbole, ML Farman, TK Mitchell, MJ Orbach, ...
Nature 434 (7036), 980-986, 2005
19572005
Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium
LJ Ma, HC Van Der Does, KA Borkovich, JJ Coleman, MJ Daboussi, ...
Nature 464 (7287), 367-373, 2010
16792010
Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus
WC Nierman, A Pain, MJ Anderson, JR Wortman, HS Kim, J Arroyo, ...
Nature 438 (7071), 1151-1156, 2005
16732005
Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae
JE Galagan, SE Calvo, C Cuomo, LJ Ma, JR Wortman, S Batzoglou, ...
Nature 438 (7071), 1105-1115, 2005
16092005
Genome sequencing and analysis of Aspergillus oryzae
M Machida, K Asai, M Sano, T Tanaka, T Kumagai, G Terai, KI Kusumoto, ...
Nature 438 (7071), 1157-1161, 2005
14882005
Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis
J Kämper, R Kahmann, M Bölker, LJ Ma, T Brefort, BJ Saville, F Banuett, ...
Nature 444 (7115), 97-101, 2006
13742006
Genome Sequence of Aedes aegypti, a Major Arbovirus Vector
V Nene, JR Wortman, D Lawson, B Haas, C Kodira, Z Tu, B Loftus, Z Xi, ...
Science 316 (5832), 1718-1723, 2007
13422007
Human T cell epitopes of Mycobacterium tuberculosis are evolutionarily hyperconserved
I Comas, J Chakravartti, PM Small, J Galagan, S Niemann, K Kremer, ...
Nature genetics 42 (6), 498-503, 2010
7932010
Lessons from the Genome Sequence of Neurospora crassa: Tracing the Path from Genomic Blueprint to Multicellular Organism
KA Borkovich, LA Alex, O Yarden, M Freitag, GE Turner, ND Read, ...
Microbiology and molecular biology reviews 68 (1), 1-108, 2004
7772004
The genome of M. acetivorans reveals extensive metabolic and physiological diversity
JE Galagan, C Nusbaum, A Roy, MG Endrizzi, P Macdonald, W FitzHugh, ...
Genome research 12 (4), 532-542, 2002
7612002
Whole-genome sequencing of rifampicin-resistant Mycobacterium tuberculosis strains identifies compensatory mutations in RNA polymerase genes
I Comas, S Borrell, A Roetzer, G Rose, B Malla, M Kato-Maeda, J Galagan, ...
Nature genetics 44 (1), 106-110, 2012
6572012
Dynamics of Pseudomonas aeruginosa genome evolution
K Mathee, G Narasimhan, C Valdes, X Qiu, JM Matewish, M Koehrsen, ...
Proceedings of the National Academy of Sciences 105 (8), 3100-3105, 2008
6402008
Comparative genomics yields insights into niche adaptation of plant vascular wilt pathogens
SJ Klosterman, KV Subbarao, S Kang, P Veronese, SE Gold, ...
PLoS pathogens 7 (7), e1002137, 2011
5342011
Use of whole genome sequencing to estimate the mutation rate of Mycobacterium tuberculosis during latent infection
CB Ford, PL Lin, MR Chase, RR Shah, O Iartchouk, J Galagan, ...
Nature genetics 43 (5), 482-486, 2011
5142011
Genomic analysis identifies targets of convergent positive selection in drug-resistant Mycobacterium tuberculosis
MR Farhat, BJ Shapiro, KJ Kieser, R Sultana, KR Jacobson, TC Victor, ...
Nature genetics 45 (10), 1183-1189, 2013
5072013
The Mycobacterium tuberculosis regulatory network and hypoxia
JE Galagan, K Minch, M Peterson, A Lyubetskaya, E Azizi, L Sweet, ...
Nature 499 (7457), 178-183, 2013
4722013
Interpreting Expression Data with Metabolic Flux Models: Predicting Mycobacterium tuberculosis Mycolic Acid Production
C Colijn, A Brandes, J Zucker, DS Lun, B Weiner, MR Farhat, TY Cheng, ...
PLoS computational biology 5 (8), e1000489, 2009
4642009
RIP: the evolutionary cost of genome defense
JE Galagan, EU Selker
TRENDS in Genetics 20 (9), 417-423, 2004
4592004
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