NanoPack: visualizing and processing long read sequencing data W De Coster, S D'Hert, DT Schultz, M Cruts, C Van Broeckhoven Bioinformatics, 2018 | 1818 | 2018 |
Towards population-scale long-read sequencing W De Coster, MH Weissensteiner, FJ Sedlazeck Nature Reviews Genetics 22 (9), 572-587, 2021 | 201 | 2021 |
Structural variants identified by Oxford Nanopore PromethION sequencing of the human genome W De Coster, P De Rijk, A De Roeck, T De Pooter, S D'Hert, M Strazisar, ... Genome research 29 (7), 1178-1187, 2019 | 168 | 2019 |
Newest methods for detecting structural variations W De Coster, C Van Broeckhoven Trends in biotechnology 37 (9), 973-982, 2019 | 86 | 2019 |
Deleterious ABCA7 mutations and transcript rescue mechanisms in early onset Alzheimer’s disease A De Roeck, T Van den Bossche, J van der Zee, J Verheijen, W De Coster, ... Acta neuropathologica 134 (3), 475-487, 2017 | 80 | 2017 |
NanoPack2: Population scale evaluation of long-read sequencing data W De Coster, R Rademakers Bioinformatics, btad311, 2023 | 77 | 2023 |
NanoSatellite: Accurate characterization of expanded tandem repeat length and sequence through whole genome long-read sequencing on PromethION A De Roeck, W De Coster, L Bossaerts, R Cacace, T De Pooter, ... Genome biology 20 (1), 1-16, 2019 | 74* | 2019 |
Loss of DPP6 in neurodegenerative dementia: a genetic player in the dysfunction of neuronal excitability R Cacace, B Heeman, S Van Mossevelde, A De Roeck, J Hoogmartens, ... Acta neuropathologica 137 (6), 901-918, 2019 | 46 | 2019 |
Methplotlib: analysis of modified nucleotides from nanopore sequencing W De Coster, EB Stovner, M Strazisar Bioinformatics 36 (10), 3236-3238, 2020 | 27 | 2020 |
Clinical variability and onset age modifiers in an extended Belgian GRN founder family E Wauters, S Van Mossevelde, K Sleegers, J van der Zee, S Engelborghs, ... Neurobiology of Aging, 2018 | 21 | 2018 |
Genomic Analysis of a Strain Collection Containing Multidrug-, Extensively Drug-, Pandrug-, and Carbapenem-Resistant Modern Clinical Isolates of Acinetobacter baumannii A Valcek, K Nesporova, C Whiteway, T De Pooter, W De Coster, ... Antimicrobial agents and chemotherapy 66 (9), e00892-22, 2022 | 13 | 2022 |
Benchmarking of small and large variants across tandem repeats A English, E Dolzhenko, H Ziaei-Jam, ND Olson, S Mckenzie, ... bioRxiv, 2023.10. 29.564632, 2023 | 10 | 2023 |
Phenotypic Characterization and Heterogeneity among Modern Clinical Isolates of Acinetobacter baumannii A Valcek, C Philippe, C Whiteway, E Robino, K Nesporova, M Bové, ... Microbiology spectrum 11 (1), e03061-22, 2023 | 9 | 2023 |
Long-Read Sequencing to Unravel Complex Structural Variants of CEP78 Leading to Cone-Rod Dystrophy and Hearing Loss G Ascari, ND Rendtorff, M De Bruyne, J De Zaeytijd, M Van Lint, ... Frontiers in Cell and Developmental Biology 9, 2021 | 9 | 2021 |
Nanopore sequencing of 1000 Genomes Project samples to build a comprehensive catalog of human genetic variation JA Gustafson, SB Gibson, N Damaraju, MPG Zalusky, K Hoekzema, ... medRxiv, 2024.03. 05.24303792, 2024 | 6 | 2024 |
An international virtual hackathon to build tools for the analysis of structural variants within species ranging from coronaviruses to vertebrates AM Mc Cartney, M Mahmoud, M Jochum, DP Agustinho, B Zorman, ... F1000Research 10, 2021 | 5 | 2021 |
Critical length in long-read resequencing W De Coster, M Strazisar, P De Rijk NAR Genomics and Bioinformatics 2 (1), lqz027, 2020 | 4 | 2020 |
The third international hackathon for applying insights into large-scale genomic composition to use cases in a wide range of organisms K Walker, D Kalra, R Lowdon, G Chen, D Molik, DC Soto, F Dabbaghie, ... F1000Research 11, 2022 | 2 | 2022 |
What are the reference strains of Acinetobacter baumannii referring to? C Philippe, A Valcek, C Whiteway, E Robino, K Nesporova, M Bové, ... bioRxiv, 2022.02. 27.482139, 2022 | 2 | 2022 |
Medically relevant tandem repeats in nanopore sequencing of control cohorts W De Coster, I Hoijer, I Bruggeman, S D'Hert, M Melin, A Ameur, ... medRxiv, 2024.03. 06.24303700, 2024 | 1 | 2024 |