Ramana V Davuluri
Ramana V Davuluri
Professor of Biomedical Informatics, State University of New York at Stony Brook, Stony Brook, NY
Verified email at - Homepage
Cited by
Cited by
A microRNA signature of hypoxia
R Kulshreshtha, M Ferracin, SE Wojcik, R Garzon, H Alder, ...
Molecular and cellular biology 27 (5), 1859-1867, 2007
CCAT2, a novel noncoding RNA mapping to 8q24, underlies metastatic progression and chromosomal instability in colon cancer
H Ling, R Spizzo, Y Atlasi, M Nicoloso, M Shimizu, RS Redis, N Nishida, ...
Genome research 23 (9), 1446-1461, 2013
Computational identification of promoters and first exons in the human genome
RV Davuluri, I Grosse, MQ Zhang
Nature genetics 29 (4), 412-417, 2001
Direct coupling of the cell cycle and cell death machinery by E2F
Z Nahle, J Polakoff, RV Davuluri, ME McCurrach, MD Jacobson, M Narita, ...
Nature cell biology 4 (11), 859-864, 2002
DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome
Y Ji, Z Zhou, H Liu, RV Davuluri
Bioinformatics 37 (15), 2112-2120, 2021
AGRIS: Arabidopsis Gene Regulatory Information Server, an information resource of Arabidopsis cis-regulatory elements and transcription factors
RV Davuluri, H Sun, SK Palaniswamy, N Matthews, C Molina, M Kurtz, ...
BMC bioinformatics 4, 1-11, 2003
The functional consequences of alternative promoter use in mammalian genomes
RV Davuluri, Y Suzuki, S Sugano, C Plass, THM Huang
Trends in Genetics 24 (4), 167-177, 2008
Single-nucleotide polymorphisms inside microRNA target sites influence tumor susceptibility
MS Nicoloso, H Sun, R Spizzo, H Kim, P Wickramasinghe, M Shimizu, ...
Cancer research 70 (7), 2789-2798, 2010
PML is a direct p53 target that modulates p53 effector functions
E De Stanchina, E Querido, M Narita, RV Davuluri, PP Pandolfi, ...
Molecular cell 13 (4), 523-535, 2004
Association of a microRNA/TP53 feedback circuitry with pathogenesis and outcome of B-cell chronic lymphocytic leukemia
M Fabbri, A Bottoni, M Shimizu, R Spizzo, MS Nicoloso, S Rossi, ...
Jama 305 (1), 59-67, 2011
ADAR1 forms a complex with Dicer to promote microRNA processing and RNA-induced gene silencing
H Ota, M Sakurai, R Gupta, L Valente, BE Wulff, K Ariyoshi, H Iizasa, ...
Cell 153 (3), 575-589, 2013
AGRIS and AtRegNet. a platform to link cis-regulatory elements and transcription factors into regulatory networks
SK Palaniswamy, S James, H Sun, RS Lamb, RV Davuluri, E Grotewold
Plant physiology 140 (3), 818-829, 2006
A microRNA component of the hypoxic response
R Kulshreshtha, RV Davuluri, GA Calin, M Ivan
Cell Death & Differentiation 15 (4), 667-671, 2008
Imaging patterns predict patient survival and molecular subtype in glioblastoma via machine learning techniques
L Macyszyn, H Akbari, JM Pisapia, X Da, M Attiah, V Pigrish, Y Bi, S Pal, ...
Neuro-oncology 18 (3), 417-425, 2015
Pro-and antiinflammatory cytokine signaling: reciprocal antagonism regulates interferon-gamma production by human natural killer cells
J Yu, M Wei, B Becknell, R Trotta, S Liu, Z Boyd, MS Jaung, BW Blaser, ...
Immunity 24 (5), 575-590, 2006
miR-145 participates with TP53 in a death-promoting regulatory loop and targets estrogen receptor-α in human breast cancer cells
R Spizzo, MS Nicoloso, L Lupini, Y Lu, J Fogarty, S Rossi, B Zagatti, ...
Cell Death & Differentiation 17 (2), 246-254, 2010
The polymorphism rs944289 predisposes to papillary thyroid carcinoma through a large intergenic noncoding RNA gene of tumor suppressor type
J Jendrzejewski, H He, HS Radomska, W Li, J Tomsic, S Liyanarachchi, ...
Proceedings of the National Academy of Sciences 109 (22), 8646-8651, 2012
NF-κB regulation of YY1 inhibits skeletal myogenesis through transcriptional silencing of myofibrillar genes
H Wang, E Hertlein, N Bakkar, H Sun, S Acharyya, J Wang, M Carathers, ...
Molecular and cellular biology 27 (12), 4374-4387, 2007
Role of cancer-associated stromal fibroblasts in metastatic colon cancer to the liver and their expression profiles
H Nakagawa, S Liyanarachchi, RV Davuluri, H Auer, EW Martin, ...
Oncogene 23 (44), 7366-7377, 2004
Loss of estrogen receptor signaling triggers epigenetic silencing of downstream targets in breast cancer
YW Leu, PS Yan, M Fan, VX Jin, JC Liu, EM Curran, WV Welshons, ...
Cancer research 64 (22), 8184-8192, 2004
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