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Johan A A Nylander
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MrModeltest v25
JAA Nylander
Program distributed by the author, 2004
9573*2004
Bayesian phylogenetic analysis of combined data
JAA Nylander, F Ronquist, JP Huelsenbeck, J Nieves-Aldrey
Systematic biology 53 (1), 47-67, 2004
19282004
AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics
JAA Nylander, JC Wilgenbusch, DL Warren, DL Swofford
Bioinformatics 24 (4), 581-583, 2008
14712008
Tracing the impact of the Andean uplift on Neotropical plant evolution
A Antonelli, JAA Nylander, C Persson, I Sanmartín
Proceedings of the National Academy of Sciences 106 (24), 9749-9754, 2009
6912009
MrAIC. pl. Program distributed by the author
JAA Nylander
Evolutionary Biology Centre, Uppsala University, 2004
602*2004
Accounting for Phylogenetic Uncertainty in Biogeography: A Bayesian Approach to Dispersal-Vicariance Analysis of the Thrushes (Aves: Turdus)
JAA Nylander, U Olsson, P Alström, I SANMARTin
Systematic Biology 57 (2), 257-268, 2008
3982008
Genome erosion in a nitrogen-fixing vertically transmitted endosymbiotic multicellular cyanobacterium
L Ran, J Larsson, T Vigil-Stenman, JAA Nylander, K Ininbergs, WW Zheng, ...
PLoS One 5 (7), e11486, 2010
2132010
An evaluation of new parsimony‐based versus parametric inference methods in biogeography: a case study using the globally distributed plant family Sapindaceae
S Buerki, F Forest, N Alvarez, JAA Nylander, N Arrigo, I Sanmartín
Journal of Biogeography 38 (3), 531-550, 2011
2012011
Phylogeny, evolution and classification of gall wasps: the plot thickens
F Ronquist, JL Nieves-Aldrey, ML Buffington, Z Liu, J Liljeblad, ...
PloS one 10 (5), e0123301, 2015
1972015
Five simple guidelines for establishing basic authenticity and reliability of newly generated fungal ITS sequences.
RH Nilsson, L Tedersoo, K Abarenkov, M Ryberg, E Kristiansson, ...
MycoKeys, 2012
1942012
Plastid and nuclear DNA markers reveal intricate relationships at subfamilial and tribal levels in the soapberry family (Sapindaceae)
S Buerki, F Forest, P Acevedo-Rodríguez, MW Callmander, JAA Nylander, ...
Molecular Phylogenetics and Evolution 51 (2), 238-258, 2009
1842009
Genome fluctuations in cyanobacteria reflect evolutionary, developmental and adaptive traits
J Larsson, JAA Nylander, B Bergman
BMC evolutionary biology 11 (1), 1-21, 2011
1792011
Functional tradeoffs underpin salinity-driven divergence in microbial community composition
CL Dupont, J Larsson, S Yooseph, K Ininbergs, J Goll, ...
PloS one 9 (2), e89549, 2014
1742014
A maximum-likelihood analysis of eight phylogenetic markers in gallwasps (Hymenoptera: Cynipidae): implications for insect phylogenetic studies
A Rokas, JAA Nylander, F Ronquist, GN Stone
Molecular Phylogenetics and Evolution 22 (2), 206-219, 2002
1332002
The phylogeny and evolution of Figitidae (Hymenoptera: Cynipoidea)
ML Buffington, JAA Nylander, JM Heraty
Cladistics 23 (5), 403-431, 2007
1142007
Phylogenetic relationships of typical antbirds (Thamnophilidae) and test of incongruence based on Bayes factors
M Irestedt, J Fjeldsĺ, JAA Nylander, PGP Ericson
BMC Evolutionary Biology 4 (1), 1-16, 2004
1062004
MrModeltest v2. Distributed by the author
JAA Nylander
Evolutionary Biology Center, Uppsala University, 2004
942004
Bayesian phylogenetics and the evolution of gall wasps
JAA Nylander
Acta Universitatis Upsaliensis, 2004
842004
Dating the diversification of the major lineages of Passeriformes (Aves)
PGP Ericson, S Klopfstein, M Irestedt, JMT Nguyen, JAA Nylander
BMC Evolutionary Biology 14 (1), 1-15, 2014
762014
The phylogenetic placement and biogeographical origins of the New Zealand stick insects (Phasmatodea)
TR Buckley, D Attanayake, JAA Nylander, S Bradler
Systematic Entomology 35 (2), 207-225, 2010
702010
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