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Gerhard G. Thallinger
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Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities
PD Schloss, SL Westcott, T Ryabin, JR Hall, M Hartmann, EB Hollister, ...
Applied and environmental microbiology 75 (23), 7537-7541, 2009
204902009
Dimension reduction techniques for the integrative analysis of multi-omics data
C Meng, OA Zeleznik, GG Thallinger, B Kuster, AM Gholami, AC Culhane
Briefings in bioinformatics 17 (4), 628-641, 2016
3952016
Inferring expressed genes by whole-genome sequencing of plasma DNA
P Ulz, GG Thallinger, M Auer, R Graf, K Kashofer, SW Jahn, L Abete, ...
Nature genetics 48 (10), 1273-1278, 2016
3522016
Lipid Data Analyzer: unattended identification and quantitation of lipids in LC-MS data
J Hartler, M Trötzmüller, C Chitraju, F Spener, HC Köfeler, GG Thallinger
Bioinformatics 27 (4), 572-577, 2011
2012011
High-quality genome sequence of Pichia pastoris CBS7435
A Küberl, J Schneider, GG Thallinger, I Anderl, D Wibberg, T Hajek, ...
Journal of biotechnology 154 (4), 312-320, 2011
1952011
Phylogenomics uncovers early hybridization and adaptive loci shaping the radiation of Lake Tanganyika cichlid fishes
I Irisarri, P Singh, S Koblmüller, J Torres-Dowdall, F Henning, P Franchini, ...
Nature communications 9 (1), 3159, 2018
1872018
A Toolbox of Diverse Promoters Related to Methanol Utilization: Functionally Verified Parts for Heterologous Pathway Expression in Pichia pastoris
T Vogl, L Sturmberger, T Kickenweiz, R Wasmayer, C Schmid, AM Hatzl, ...
ACS synthetic biology 5 (2), 172-186, 2016
1532016
The mzTab data exchange format: communicating mass-spectrometry-based proteomics and metabolomics experimental results to a wider audience
J Griss, AR Jones, T Sachsenberg, M Walzer, L Gatto, J Hartler, ...
Molecular & Cellular Proteomics 13 (10), 2765-2775, 2014
1442014
Deciphering lipid structures based on platform-independent decision rules
J Hartler, A Triebl, A Ziegl, M Trötzmüller, GN Rechberger, OA Zeleznik, ...
Nature methods 14 (12), 1171-1174, 2017
1432017
Comprehensive genome and epigenome characterization of CHO cells in response to evolutionary pressures and over time
J Feichtinger, I Hernández, C Fischer, M Hanscho, N Auer, M Hackl, ...
Biotechnology and bioengineering 113 (10), 2241-2253, 2016
1392016
Alterations in the colonic microbiota in response to osmotic diarrhea
G Gorkiewicz, GG Thallinger, S Trajanoski, S Lackner, G Stocker, ...
PloS one 8 (2), e55817, 2013
1342013
The Sphagnum microbiome supports bog ecosystem functioning under extreme conditions
A Bragina, L Oberauner‐Wappis, C Zachow, B Halwachs, GG Thallinger, ...
Molecular ecology 23 (18), 4498-4510, 2014
1172014
Stenotrophomonas comparative genomics reveals genes and functions that differentiate beneficial and pathogenic bacteria
P Alavi, MR Starcher, GG Thallinger, C Zachow, H Müller, G Berg
BMC genomics 15, 1-15, 2014
1082014
Lipidomic analysis of lipid droplets from murine hepatocytes reveals distinct signatures for nutritional stress
C Chitraju, M Trötzmüller, J Hartler, H Wolinski, GG Thallinger, A Lass, ...
Journal of lipid research 53 (10), 2141-2152, 2012
1062012
Critical issues in mycobiota analysis
B Halwachs, N Madhusudhan, R Krause, RH Nilsson, C Moissl-Eichinger, ...
Frontiers in Microbiology 8, 210806, 2017
972017
VASCo: computation and visualization of annotated protein surface contacts
G Steinkellner, R Rader, GG Thallinger, C Kratky, K Gruber
Bmc Bioinformatics 10, 1-11, 2009
962009
The Human Gastric Microbiome Is Predicated upon Infection with Helicobacter pylori
I Klymiuk, C Bilgilier, A Stadlmann, J Thannesberger, MT Kastner, ...
Frontiers in microbiology 8, 2508, 2017
872017
A novel stable isotope labelling assisted workflow for improved untargeted LC–HRMS based metabolomics research
C Bueschl, B Kluger, M Lemmens, G Adam, G Wiesenberger, ...
Metabolomics 10, 754-769, 2014
842014
More than cell dust: microparticles isolated from cerebrospinal fluid of brain injured patients are messengers carrying mRNAs, miRNAs, and proteins
S Patz, C Trattnig, G Grünbacher, B Ebner, C Gülly, A Novak, B Rinner, ...
Journal of neurotrauma 30 (14), 1232-1242, 2013
832013
QPCR: Application for real-time PCR data management and analysis
S Pabinger, GG Thallinger, R Snajder, H Eichhorn, R Rader, Z Trajanoski
BMC bioinformatics 10, 1-10, 2009
762009
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