Tom Oinn
Tom Oinn
Freelance (formerly EMBL-EBI)
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Taverna: a tool for the composition and enactment of bioinformatics workflows
T Oinn, M Addis, J Ferris, D Marvin, M Senger, M Greenwood, T Carver, ...
Bioinformatics 20 (17), 3045-3054, 2004
Taverna: a tool for building and running workflows of services
D Hull, K Wolstencroft, R Stevens, C Goble, MR Pocock, P Li, T Oinn
Nucleic acids research 34 (suppl_2), W729-W732, 2006
The InterPro database, an integrated documentation resource for protein families, domains and functional sites
R Apweiler, TK Attwood, A Bairoch, A Bateman, E Birney, M Biswas, ...
Nucleic acids research 29 (1), 37-40, 2001
Taverna: lessons in creating a workflow environment for the life sciences
T Oinn, M Greenwood, M Addis, MN Alpdemir, J Ferris, K Glover, C Goble, ...
Concurrency and computation: Practice and experience 18 (10), 1067-1100, 2006
The gene ontology annotation (GOA) project: implementation of GO in SWISS-PROT, TrEMBL, and InterPro
E Camon, M Magrane, D Barrell, D Binns, W Fleischmann, P Kersey, ...
Genome research 13 (4), 662-672, 2003
InterPro—an integrated documentation resource for protein families, domains and functional sites
R Apweiler, TK Attwood, A Bairoch, A Bateman, E Birney, M Biswas, ...
Bioinformatics 16 (12), 1145-1150, 2000
Taverna, reloaded
P Missier, S Soiland-Reyes, S Owen, W Tan, A Nenadic, I Dunlop, ...
Scientific and Statistical Database Management: 22nd International …, 2010
Exploring Williams–Beuren syndrome using myGrid
RD Stevens, HJ Tipney, CJ Wroe, TM Oinn, M Senger, PW Lord, ...
Bioinformatics 20 (suppl_1), i303-i310, 2004
Provenance of e-science experiments-experience from bioinformatics
M Greenwood, C Goble, R Stevens, J Zhao, M Addis, D Marvin, L Moreau, ...
Taverna/myGrid: Aligning a Workflow System with the Life Sciences Community
T Oinn, P Li, DB Kell, C Goble, A Goderis, M Greenwood, D Hull, ...
Workflows for e-Science: scientific workflows for Grids, 300-319, 2007
Soaplab-a unified Sesame door to analysis tools
M Senger
Proceedings of the UK e-Science All Hands Meeting, 2003
Taverna workflows: Syntax and semantics
D Turi, P Missier, C Goble, D De Roure, T Oinn
Third IEEE International Conference on e-Science and Grid Computing (e …, 2007
Experiences with e-Science workflow specification and enactment in bioinformatics
M Addis, J Ferris, M Greenwood, P Li, D Marvin, T Oinn, A Wipat
Proceedings of UK e-Science All Hands Meeting 2003, 459-466, 2003
On the use of agents in a bioinformatics grid
L Moreau, S Miles, C Goble, M Greenwood, V Dialani, M Addis, ...
CCGrid 2003. 3rd IEEE/ACM International Symposium on Cluster Computing and …, 2003
Metadata management in the taverna workflow system
K Belhajjame, K Wolstencroft, O Corcho, T Oinn, F Tanoh, A William, ...
2008 Eighth IEEE International Symposium on Cluster Computing and the Grid …, 2008
Performing statistical analyses on quantitative data in Taverna workflows: an example using R and maxdBrowse to identify differentially-expressed genes from microarray data
P Li, JI Castrillo, G Velarde, I Wassink, S Soiland-Reyes, S Owen, ...
BMC bioinformatics 9, 1-11, 2008
The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows
T Katayama, K Arakawa, M Nakao, K Ono, KF Aoki-Kinoshita, ...
Journal of biomedical semantics 1, 1-19, 2010
Delivering web service coordination capability to users
T Oinn, M Addis, J Ferris, D Marvin, M Greenwood, C Goble, A Wipat, P Li, ...
Proceedings of the 13th international World Wide Web conference on Alternate …, 2004
The data playground: An intuitive workflow specification environment
A Gibson, M Gamble, K Wolstencroft, T Oinn, C Goble, K Belhajjame, ...
Future Generation Computer Systems 25 (4), 453-459, 2009
Automated manipulation of systems biology models using libSBML within Taverna workflows
P Li, T Oinn, S Soiland, DB Kell
Bioinformatics 24 (2), 287-289, 2008
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