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Zheng Xia
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The cancer genome atlas pan-cancer analysis project
JN Weinstein, EA Collisson, GB Mills, KRM Shaw, BA Ozenberger, ...
Nature genetics 45 (10), 1113-1120, 2013
65382013
Comprehensive and integrative genomic characterization of hepatocellular carcinoma
A Ally, M Balasundaram, R Carlsen, E Chuah, A Clarke, N Dhalla, RA Holt, ...
Cell 169 (7), 1327-1341. e23, 2017
18802017
Multiplatform analysis of 12 cancer types reveals molecular classification within and across tissues of origin
KA Hoadley, C Yau, DM Wolf, AD Cherniack, D Tamborero, S Ng, ...
Cell 158 (4), 929-944, 2014
15442014
Epigenomic Profiling of Young and Aged HSCs Reveals Concerted Changes during Aging that Reinforce Self-Renewal
D Sun, M Luo, M Jeong, B Rodriguez, Z Xia, R Hannah, H Wang, T Le, ...
Cell stem cell 14 (5), 673-688, 2014
6282014
Dynamic analyses of alternative polyadenylation from RNA-seq reveal a 3′-UTR landscape across seven tumour types
Z Xia, LA Donehower, TA Cooper, JR Neilson, DA Wheeler, EJ Wagner, ...
Nature communications 5 (1), 5274, 2014
5502014
CFIm25 links alternative polyadenylation to glioblastoma tumour suppression
CP Masamha*, Z Xia*, J Yang, TR Albrecht, M Li, AB Shyu, W Li, ...
Nature, 2014
4042014
Semi-supervised drug-protein interaction prediction from heterogeneous biological spaces
Z Xia, LY Wu, X Zhou, STC Wong
BMC systems biology 4, 1-16, 2010
3912010
Dnmt3a and Dnmt3b Have Overlapping and Distinct Functions in Hematopoietic Stem Cells
GA Challen, D Sun, A Mayle, M Jeong, M Luo, B Rodriguez, C Mallaney, ...
Cell stem cell 15 (3), 350-364, 2014
3692014
Nucleosome loss leads to global transcriptional up-regulation and genomic instability during yeast aging
Z Hu, K Chen, Z Xia, M Chavez, S Pal, JH Seol, CC Chen, W Li, JK Tyler
Genes & development 28 (4), 396-408, 2014
3302014
ZMYND11 links histone H3. 3K36me3 to transcription elongation and tumour suppression
H Wen, Y Li, Y Xi, S Jiang, S Stratton, D Peng, K Tanaka, Y Ren, Z Xia, ...
Nature 508 (7495), 263-268, 2014
3282014
Broad H3K4me3 is associated with increased transcription elongation and enhancer activity at tumor-suppressor genes
K Chen, Z Chen, D Wu, L Zhang, X Lin, J Su, B Rodriguez, Y Xi, Z Xia, ...
Nature genetics 47 (10), 1149-1157, 2015
3252015
PRMT9 is a type II methyltransferase that methylates the splicing factor SAP145
Y Yang, A Hadjikyriacou, Z Xia, S Gayatri, D Kim, C Zurita-Lopez, R Kelly, ...
Nature communications 6 (1), 6428, 2015
2402015
Highly scalable generation of DNA methylation profiles in single cells
RM Mulqueen, D Pokholok, SJ Norberg, KA Torkenczy, AJ Fields, D Sun, ...
Nature biotechnology 36 (5), 428-431, 2018
2312018
Whole Transcriptome Sequencing Reveals Extensive Unspliced mRNA in Metastatic Castration-Resistant Prostate Cancer
AG Sowalsky*, Z Xia*, L Wang, H Zhao, S Chen, GJ Bubley, SP Balk, W Li
Molecular Cancer Research 13 (1), 98-106, 2015
2022015
Androgen receptor activity in T cells limits checkpoint blockade efficacy
X Guan, F Polesso, C Wang, A Sehrawat, RM Hawkins, SE Murray, ...
Nature 606 (7915), 791-796, 2022
1972022
The overlooked fact: fundamental need for spike-in control for virtually all genome-wide analyses
K Chen, Z Hu, Z Xia, D Zhao, W Li, JK Tyler
Molecular and cellular biology 36 (5), 662-667, 2016
1942016
Long Non-Coding RNAs Control Hematopoietic Stem Cell Function
M Luo, M Jeong, D Sun, HJ Park, BAT Rodriguez, Z Xia, L Yang, X Zhang, ...
Cell Stem Cell, 2015
1782015
Alternative splicing regulates vesicular trafficking genes in cardiomyocytes during postnatal heart development
J Giudice, Z Xia, ET Wang, MA Scavuzzo, AJ Ward, A Kalsotra, W Wang, ...
Nature communications 5 (1), 3603, 2014
1682014
The Histone-H3K4-Specific Demethylase KDM5B Binds to Its Substrate and Product through Distinct PHD Fingers
BJ Klein, L Piao, Y Xi, H Rincon-Arano, SB Rothbart, D Peng, H Wen, ...
Cell Reports, 2014
1672014
Identifying phenotype-associated subpopulations by integrating bulk and single-cell sequencing data
D Sun, X Guan, AE Moran, LY Wu, DZ Qian, P Schedin, MS Dai, ...
Nature biotechnology 40 (4), 527-538, 2022
1642022
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