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Stephen P. Ficklin
Stephen P. Ficklin
Department of Horticulture, Washington State University
Verified email at wsu.edu - Homepage
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Cited by
Year
The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution
International Peach Genome Initiative, I Verde, AG Abbott, S Scalabrin, ...
Nature genetics 45 (5), 487-494, 2013
11532013
15 years of GDR: New data and functionality in the Genome Database for Rosaceae
S Jung, T Lee, CH Cheng, K Buble, P Zheng, J Yu, J Humann, SP Ficklin, ...
Nucleic acids research 47 (D1), D1137-D1145, 2019
3322019
CottonGen: a genomics, genetics and breeding database for cotton research
J Yu, S Jung, CH Cheng, SP Ficklin, T Lee, P Zheng, D Jones, RG Percy, ...
Nucleic acids research 42 (D1), D1229-D1236, 2014
3042014
Development and preliminary evaluation of a 90 K AxiomŽ SNP array for the allo-octoploid cultivated strawberry Fragaria × ananassa
NV Bassil, TM Davis, H Zhang, S Ficklin, M Mittmann, T Webster, ...
BMC genomics 16, 1-30, 2015
2232015
The genome database for Rosaceae (GDR): year 10 update
S Jung, SP Ficklin, T Lee, CH Cheng, A Blenda, P Zheng, J Yu, ...
Nucleic acids research 42 (D1), D1237-D1244, 2014
2062014
CMD: a Cotton Microsatellite Database resource for Gossypium genomics
A Blenda, J Scheffler, B Scheffler, M Palmer, JM Lacape, JZ Yu, ...
BMC genomics 7, 1-10, 2006
1632006
Modes of gene duplication contribute differently to genetic novelty and redundancy, but show parallels across divergent angiosperms
Y Wang, X Wang, H Tang, X Tan, SP Ficklin, FA Feltus, AH Paterson
PloS one 6 (12), e28150, 2011
1602011
Gene coexpression network alignment and conservation of gene modules between two grass species: maize and rice
SP Ficklin, FA Feltus
Plant Physiology 156 (3), 1244-1256, 2011
1582011
Development and evaluation of a genome-wide 6K SNP array for diploid sweet cherry and tetraploid sour cherry
C Peace, N Bassil, D Main, S Ficklin, UR Rosyara, T Stegmeir, A Sebolt, ...
PLoS One 7 (12), e48305, 2012
1472012
GDR (G enome D atabase for R osaceae): integrated web resources for Rosaceae genomics and genetics research
S Jung, C Jesudurai, M Staton, Z Du, S Ficklin, I Cho, A Abbott, J Tomkins, ...
BMC bioinformatics 5, 1-8, 2004
1352004
The association of multiple interacting genes with specific phenotypes in rice using gene coexpression networks
SP Ficklin, F Luo, FA Feltus
Plant physiology 154 (1), 13-24, 2010
1212010
Chestnut resistance to the blight disease: insights from transcriptome analysis
A Barakat, M Staton, CH Cheng, J Park, NMB Yassin, S Ficklin, CC Yeh, ...
BMC Plant Biology 12, 1-15, 2012
1052012
Structural and functional annotation of eukaryotic genomes with GenSAS
JL Humann, T Lee, S Ficklin, D Main
Gene prediction: methods and protocols, 29-51, 2019
922019
Tripal: a construction toolkit for online genome databases
SP Ficklin, LA Sanderson, CH Cheng, ME Staton, T Lee, IH Cho, S Jung, ...
Database 2011, bar044, 2011
802011
AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture
L Harper, J Campbell, EKS Cannon, S Jung, M Poelchau, R Walls, ...
Database 2018, bay088, 2018
762018
Massive-scale gene co-expression network construction and robustness testing using random matrix theory
SM Gibson, SP Ficklin, S Isaacson, F Luo, FA Feltus, MC Smith
PloS one 8 (2), e55871, 2013
652013
Tripal v1. 1: a standards-based toolkit for construction of online genetic and genomic databases
LA Sanderson, SP Ficklin, CH Cheng, S Jung, FA Feltus, KE Bett, D Main
Database 2013, bat075, 2013
612013
Discovering condition-specific gene co-expression patterns using gaussian mixture models: a cancer case study
SP Ficklin, LJ Dunwoodie, WL Poehlman, C Watson, KE Roche, FA Feltus
Scientific reports 7 (1), 8617, 2017
542017
A physical map of the Chinese chestnut (Castanea mollissima) genome and its integration with the genetic map
GC Fang, BP Blackmon, ME Staton, CD Nelson, TL Kubisiak, BA Olukolu, ...
Tree genetics & genomes 9, 525-537, 2013
492013
Dissecting the genetic architecture of aphanomyces root rot resistance in lentil by QTL mapping and genome-wide association study
Y Ma, A Marzougui, CJ Coyne, S Sankaran, D Main, LD Porter, D Mugabe, ...
International Journal of Molecular Sciences 21 (6), 2129, 2020
412020
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