| Species-level paraphyly and polyphyly: frequency, causes, and consequences, with insights from animal mitochondrial DNA DJ Funk, KE Omland Annual Review of Ecology, Evolution, and Systematics 34 (1), 397-423, 2003 | 2452 | 2003 |
| Divergent selection and heterogeneous genomic divergence P Nosil, DJ Funk, D Ortiz‐Barrientos Molecular ecology 18 (3), 375-402, 2009 | 1274 | 2009 |
| Reproductive isolation caused by natural selection against immigrants from divergent habitats P Nosil, TH Vines, DJ Funk Evolution 59 (4), 705-719, 2005 | 880 | 2005 |
| Heterogeneous genomic differentiation between walking‐stick ecotypes:“isolation by adaptation” and multiple roles for divergent selection P Nosil, SP Egan, DJ Funk Evolution 62 (2), 316-336, 2008 | 532 | 2008 |
| Ecological divergence exhibits consistently positive associations with reproductive isolation across disparate taxa DJ Funk, P Nosil, WJ Etges Proceedings of the National Academy of Sciences 103 (9), 3209-3213, 2006 | 475 | 2006 |
| Herbivorous insects: model systems for the comparative study of speciation ecology DJ Funk, KE Filchak, JL Feder Genetics of Mate Choice: From Sexual Selection to Sexual Isolation, 251-267, 2002 | 366 | 2002 |
| ISOLATING A ROLE FOR NATURAL SELECTION IN SPECIATION: HOST ADAPTATION AND SEXUAL ISOLATION IN NEOCHLAMISUS BEBBIANAE LEAF … DJ Funk Evolution 52 (6), 1744-1759, 1998 | 337 | 1998 |
| GENETIC CONSTRAINTS ON MACROEVOLUTION: THE EVOLUTION OF HOST AFFILIATION IN THE LEAF BEETLE GENUS OPHRAELLA DJ Futuyma, MC Keese, DJ Funk Evolution 49 (5), 797-809, 1995 | 273 | 1995 |
| Specialists make faster decisions than generalists: experiments with aphids EA Bernays, DJ Funk Proceedings of the Royal Society of London. Series B: Biological Sciences …, 1999 | 208 | 1999 |
| Morphometric Inferences on Sibling Species and Sexual Dimorphism in Neochlamisus Bebbianae Leaf Beetles: Multivariate Applications of the Thin-Plate Spline DC Adams, DJ Funk Systematic biology 46 (1), 180-194, 1997 | 197 | 1997 |
| Mitochondrial DNA sequences and multiple data sets: a phylogenetic study of phytophagous beetles (Chrysomelidae: Ophraella). DJ Funk, DJ Futuyma, G Ortí, A Meyer Molecular Biology and Evolution 12 (4), 627-640, 1995 | 171 | 1995 |
| Intraspecific variation in symbiont genomes: bottlenecks and the aphid-Buchnera association DJ Funk, JJ Wernegreen, NA Moran Genetics 157 (2), 477-489, 2001 | 161 | 2001 |
| A history of host associations and evolutionary diversification for Ophraella (Coleoptera: Chrysomelidae): new evidence from mitochondrial DNA DJ Funk, DJ Futuyma, G Orti, A Meyer Evolution 49 (5), 1008-1017, 1995 | 160 | 1995 |
| Selection and genomic differentiation during ecological speciation: isolating the contributions of host association via a comparative genome scan of Neochlamisus bebbianae leaf … SP Egan, P Nosil, DJ Funk Evolution 62 (5), 1162-1181, 2008 | 143 | 2008 |
| Intraspecific phylogenetic congruence among multiple symbiont genomes DJ Funk, L Helbling, JJ Wernegreen, NA Moran Proceedings of the Royal Society of London. Series B: Biological Sciences …, 2000 | 141 | 2000 |
| Molecular systematics of cytochrome oxidase I and 16S from Neochlamisus leaf beetles and the importance of sampling. DJ Funk Molecular Biology and Evolution 16 (1), 67-82, 1999 | 120 | 1999 |
| Individual advantages to ecological specialization: insights on cognitive constraints from three conspecific taxa SP Egan, DJ Funk Proceedings of the Royal Society B: Biological Sciences 273 (1588), 843-848, 2006 | 111 | 2006 |
| Ecologically dependent postmating isolation between sympatric host forms of Neochlamisus bebbianae leaf beetles SP Egan, DJ Funk Proceedings of the National Academy of Sciences 106 (46), 19426-19431, 2009 | 99 | 2009 |
| GEOGRAPHIC VARIATION IN HOST SPECIFICITY REVEALS HOST RANGE EVOLUTION IN UROLEUCON AMBROSIAE APHIDS DJ Funk, EA Bernays Ecology 82 (3), 726-739, 2001 | 77 | 2001 |
| Lateral Phage Transfer in Obligate Intracellular Bacteria (Wolbachia): Verification from Natural Populations ME Chafee, DJ Funk, RG Harrison, SR Bordenstein Molecular Biology and Evolution 27 (3), 501-505, 2009 | 72 | 2009 |
