Sonja Lehtinen
Sonja Lehtinen
Verified email at
Cited by
Cited by
CATH: comprehensive structural and functional annotations for genome sequences
I Sillitoe, TE Lewis, A Cuff, S Das, P Ashford, NL Dawson, N Furnham, ...
Nucleic acids research 43 (D1), D376-D381, 2015
Evolution of antibiotic resistance is linked to any genetic mechanism affecting bacterial duration of carriage
S Lehtinen, F Blanquart, NJ Croucher, P Turner, M Lipsitch, C Fraser
Proceedings of the National Academy of Sciences 114 (5), 1075-1080, 2017
Quantifying the impact of quarantine duration on COVID-19 transmission
P Ashcroft, S Lehtinen, DC Angst, N Low, S Bonhoeffer
Elife 10, e63704, 2021
Estimating the effects of non-pharmaceutical interventions on the number of new infections with COVID-19 during the first epidemic wave
N Banholzer, E Van Weenen, A Lison, A Cenedese, A Seeliger, ...
PLoS one 16 (6), e0252827, 2021
COVID-19 infectivity profile correction
P Ashcroft, JS Huisman, S Lehtinen, JA Bouman, CL Althaus, RR Regoes, ...
arXiv preprint arXiv:2007.06602, 2020
Gene3D: expanding the utility of domain assignments
SD Lam, NL Dawson, S Das, I Sillitoe, P Ashford, D Lee, S Lehtinen, ...
Nucleic acids research 44 (D1), D404-D409, 2016
On the evolutionary ecology of multidrug resistance in bacteria
S Lehtinen, F Blanquart, M Lipsitch, C Fraser, ...
PLoS pathogens 15 (5), e1007763, 2019
The evolution of antibiotic resistance in a structured host population
F Blanquart, S Lehtinen, M Lipsitch, C Fraser
Journal of The Royal Society Interface 15 (143), 20180040, 2018
On the relationship between serial interval, infectiousness profile and generation time
S Lehtinen, P Ashcroft, S Bonhoeffer
Journal of the Royal Society Interface 18 (174), 20200756, 2021
An evolutionary model to predict the frequency of antibiotic resistance under seasonal antibiotic use, and an application to Streptococcus pneumoniae
F Blanquart, S Lehtinen, C Fraser
Proceedings of the Royal Society B: Biological Sciences 284 (1855), 20170679, 2017
Mathematical modelling for antibiotic resistance control policy: do we know enough?
GM Knight, NG Davies, C Colijn, F Coll, T Donker, DR Gifford, RE Glover, ...
BMC infectious diseases 19, 1-9, 2019
Factors favouring the evolution of multidrug resistance in bacteria
E Jacopin, S Lehtinen, F Débarre, F Blanquart
Journal of the Royal Society Interface 17 (168), 20200105, 2020
Stress induces remodelling of yeast interaction and co-expression networks
S Lehtinen, FX Marsellach, S Codlin, A Schmidt, M Clément-Ziza, A Beyer, ...
Molecular BioSystems 9 (7), 1697-1707, 2013
Evolutionary mechanisms that determine which bacterial genes are carried on plasmids
S Lehtinen, JS Huisman, S Bonhoeffer
Evolution Letters 5 (3), 290-301, 2021
Horizontal gene transfer rate is not the primary determinant of observed antibiotic resistance frequencies in Streptococcus pneumoniae
S Lehtinen, C Chewapreecha, J Lees, WP Hanage, M Lipsitch, ...
Science advances 6 (21), eaaz6137, 2020
Test-trace-isolate-quarantine (TTIQ) intervention strategies after symptomatic COVID-19 case identification
P Ashcroft, S Lehtinen, S Bonhoeffer
PloS one 17 (2), e0263597, 2022
Gene function prediction from functional association networks using kernel partial least squares regression
S Lehtinen, J Lees, J Bähler, J Shawe-Taylor, C Orengo
PloS one 10 (8), e0134668, 2015
Plasmid co-infection: linking biological mechanisms to ecological and evolutionary dynamics
C Igler, JS Huisman, B Siedentop, S Bonhoeffer, S Lehtinen
Philosophical Transactions of the Royal Society B 377 (1842), 20200478, 2022
Epidemiological dynamics of bacteriocin competition and antibiotic resistance
S Lehtinen, NJ Croucher, F Blanquart, C Fraser
Proceedings of the Royal Society B 289 (1984), 20221197, 2022
Co-expression network models suggest that stress increases tolerance to mutations
S Lehtinen, J Bähler, C Orengo
Scientific reports 5 (1), 16726, 2015
The system can't perform the operation now. Try again later.
Articles 1–20