David Swarbreck
David Swarbreck
Group Leader, Earlham Institute
Verified email at
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Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
Management Group Liefer Laura A. 51 Wetterstrand Kris A. 51 Good Peter J. 51 ...
nature 447 (7146), 799-816, 2007
Shifting the limits in wheat research and breeding using a fully annotated reference genome
International Wheat Genome Sequencing Consortium (IWGSC), R Appels, ...
Science 361 (6403), eaar7191, 2018
The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools
P Lamesch, TZ Berardini, D Li, D Swarbreck, C Wilks, R Sasidharan, ...
Nucleic acids research 40 (D1), D1202-D1210, 2012
A physical, genetic and functional sequence assembly of the barley genome.
KF Mayer, R Waugh, P Langridge, TJ Close, RP Wise, A Graner, ...
Nature 491, 711-716, 2012
The DNA sequence of the human X chromosome
MT Ross, DV Grafham, AJ Coffey, S Scherer, K McLay, D Muzny, ...
Nature 434 (7031), 325-337, 2005
The Arabidopsis Information Resource (TAIR): gene structure and function annotation
D Swarbreck, C Wilks, P Lamesch, TZ Berardini, M Garcia-Hernandez, ...
Nucleic acids research 36 (suppl_1), D1009-D1014, 2007
GENCODE: producing a reference annotation for ENCODE
J Harrow, F Denoeud, A Frankish, A Reymond, CK Chen, J Chrast, ...
Genome biology 7 (1), 1-9, 2006
Multiple wheat genomes reveal global variation in modern breeding
S Walkowiak, L Gao, C Monat, G Haberer, MT Kassa, J Brinton, ...
Nature 588 (7837), 277-283, 2020
Comparative metatranscriptomics reveals kingdom level changes in the rhizosphere microbiome of plants
TR Turner, K Ramakrishnan, J Walshaw, D Heavens, M Alston, ...
The ISME journal 7 (12), 2248-2258, 2013
The DNA sequence and biological annotation of human chromosome 1
SG Gregory, KF Barlow, KE McLay, R Kaul, D Swarbreck, A Dunham, ...
Nature 441 (7091), 315-321, 2006
An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations
BJ Clavijo, L Venturini, C Schudoma, GG Accinelli, G Kaithakottil, J Wright, ...
Genome research 27 (5), 885-896, 2017
Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant species
TC Mathers, Y Chen, G Kaithakottil, F Legeai, ST Mugford, ...
Genome biology 18 (1), 1-20, 2017
DNA sequence and analysis of human chromosome 9
SJ Humphray, K Oliver, AR Hunt, RW Plumb, JE Loveland, KL Howe, ...
Nature 429 (6990), 369-374, 2004
Genome sequence and genetic diversity of European ash trees
ESA Sollars, AL Harper, LJ Kelly, CM Sambles, RH Ramirez-Gonzalez, ...
Nature 541 (7636), 212-216, 2017
DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage
MC Zody, M Garber, DJ Adams, T Sharpe, J Harrow, JR Lupski, ...
Nature 440 (7087), 1045-1049, 2006
Chromosome-scale genome assembly provides insights into rye biology, evolution and agronomic potential
MT Rabanus-Wallace, B Hackauf, M Mascher, T Lux, T Wicker, ...
Nature Genetics 53 (4), 564-573, 2021
Genetic architecture and evolution of the S locus supergene in Primula vulgaris
J Li, JM Cocker, J Wright, MA Webster, M McMullan, S Dyer, D Swarbreck, ...
Nature plants 2 (12), 1-7, 2016
Leveraging multiple transcriptome assembly methods for improved gene structure annotation
L Venturini, S Caim, GG Kaithakottil, DL Mapleson, D Swarbreck
GigaScience 7 (8), giy093, 2018
Tissue-specific whole transcriptome sequencing in castor, directed at understanding triacylglycerol lipid biosynthetic pathways
AP Brown, JTM Kroon, D Swarbreck, M Febrer, TR Larson, IA Graham, ...
PLoS One 7 (2), e30100, 2012
The mucin-degradation strategy of Ruminococcus gnavus: The importance of intramolecular trans-sialidases
EH Crost, LE Tailford, M Monestier, D Swarbreck, B Henrissat, ...
Gut microbes 7 (4), 302-312, 2016
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