Eileen E Furlong
Cited by
Cited by
Transcription factors: from enhancer binding to developmental control
F Spitz, EEM Furlong
Nature reviews genetics 13 (9), 613-626, 2012
Gene expression during the life cycle of Drosophila melanogaster
MN Arbeitman, EEM Furlong, F Imam, E Johnson, BH Null, BS Baker, ...
Science 297 (5590), 2270-2275, 2002
Ultrasensitive proteome analysis using paramagnetic bead technology
CS Hughes, S Foehr, DA Garfield, EE Furlong, LM Steinmetz, J Krijgsveld
Molecular systems biology 10 (10), 757, 2014
Tissue-specific analysis of chromatin state identifies temporal signatures of enhancer activity during embryonic development
S Bonn, RP Zinzen, C Girardot, EH Gustafson, A Perez-Gonzalez, ...
Nature genetics 44 (2), 148-156, 2012
Enhancer loops appear stable during development and are associated with paused polymerase
Y Ghavi-Helm, FA Klein, T Pakozdi, L Ciglar, D Noordermeer, W Huber, ...
Nature 512 (7512), 96-100, 2014
Developmental enhancers and chromosome topology
EEM Furlong, M Levine
Science 361 (6409), 1341-1345, 2018
The International Human Epigenome Consortium: a blueprint for scientific collaboration and discovery
HG Stunnenberg, S Abrignani, D Adams, M de Almeida, L Altucci, V Amin, ...
Cell 167 (5), 1145-1149, 2016
Combinatorial binding predicts spatio-temporal cis-regulatory activity
RP Zinzen, C Girardot, J Gagneur, M Braun, EEM Furlong
Nature 462 (7269), 65-70, 2009
A core transcriptional network for early mesoderm development in Drosophila melanogaster
T Sandmann, C Girardot, M Brehme, W Tongprasit, V Stolc, EEM Furlong
Genes & development 21 (4), 436-449, 2007
Patterns of gene expression during Drosophila mesoderm development
EEM Furlong, EC Andersen, B Null, KP White, MP Scott
Science 293 (5535), 1629-1633, 2001
The cis-regulatory dynamics of embryonic development at single-cell resolution
DA Cusanovich, JP Reddington, DA Garfield, RM Daza, D Aghamirzaie, ...
Nature 555 (7697), 538-542, 2018
Highly rearranged chromosomes reveal uncoupling between genome topology and gene expression
Y Ghavi-Helm, A Jankowski, S Meiers, RR Viales, JO Korbel, ...
Nature genetics 51 (8), 1272-1282, 2019
A transcription factor collective defines cardiac cell fate and reflects lineage history
G Junion, M Spivakov, C Girardot, M Braun, EH Gustafson, E Birney, ...
Cell 148 (3), 473-486, 2012
The role of transcription in shaping the spatial organization of the genome
B van Steensel, EEM Furlong
Nature reviews Molecular cell biology 20 (6), 327-337, 2019
A temporal map of transcription factor activity: mef2 directly regulates target genes at all stages of muscle development
T Sandmann, LJ Jensen, JS Jakobsen, MM Karzynski, MP Eichenlaub, ...
Developmental cell 10 (6), 797-807, 2006
Shadow enhancers are pervasive features of developmental regulatory networks
E Cannavò, P Khoueiry, DA Garfield, P Geeleher, T Zichner, ...
Current Biology 26 (1), 38-51, 2016
Conservation of transcription factor binding specificities across 600 million years of bilateria evolution
KR Nitta, A Jolma, Y Yin, E Morgunova, T Kivioja, J Akhtar, K Hens, ...
elife 4, e04837, 2015
The degree of enhancer or promoter activity is reflected by the levels and directionality of eRNA transcription
O Mikhaylichenko, V Bondarenko, D Harnett, IE Schor, M Males, ...
Genes & development 32 (1), 42-57, 2018
Dynamic regulation by polycomb group protein complexes controls pattern formation and the cell cycle in Drosophila
K Oktaba, L Gutiérrez, J Gagneur, C Girardot, AK Sengupta, EEM Furlong, ...
Developmental cell 15 (6), 877-889, 2008
The road ahead in genetics and genomics
AL McGuire, S Gabriel, SA Tishkoff, A Wonkam, A Chakravarti, ...
Nature Reviews Genetics 21 (10), 581-596, 2020
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