Andrew Tolonen
Andrew Tolonen
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Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation
G Rocap, FW Larimer, J Lamerdin, S Malfatti, P Chain, NA Ahlgren, ...
Nature 424 (6952), 1042-1047, 2003
DAF-16 target genes that control C. elegans life-span and metabolism
SS Lee, S Kennedy, AC Tolonen, G Ruvkun
science 300 (5619), 644-647, 2003
Precise manipulation of chromosomes in vivo enables genome-wide codon replacement
FJ Isaacs, PA Carr, HH Wang, MJ Lajoie, B Sterling, L Kraal, AC Tolonen, ...
Science 333 (6040), 348-353, 2011
Transfer of photosynthesis genes to and from Prochlorococcus viruses
D Lindell, MB Sullivan, ZI Johnson, AC Tolonen, F Rohwer, SW Chisholm
Proceedings of the National Academy of Sciences 101 (30), 11013-11018, 2004
Human genetic variation and the gut microbiome in disease
AB Hall, AC Tolonen, RJ Xavier
Nature Reviews Genetics 18 (11), 690-699, 2017
Highly plastic genome of Microcystis aeruginosa PCC 7806, a ubiquitous toxic freshwater cyanobacterium
L Frangeul, P Quillardet, AM Castets, JF Humbert, HCP Matthijs, D Cortez, ...
BMC genomics 9, 1-20, 2008
Global gene expression of Prochlorococcus ecotypes in response to changes in nitrogen availability
AC Tolonen, J Aach, D Lindell, ZI Johnson, T Rector, R Steen, GM Church, ...
Molecular systems biology 2 (1), 53, 2006
Proteome‐wide systems analysis of a cellulosic biofuel‐producing microbe
AC Tolonen, W Haas, AC Chilaka, J Aach, SP Gygi, GM Church
Molecular systems biology 7 (1), 461, 2011
Functional diversity of carbohydrate-active enzymes enabling a bacterium to ferment plant biomass
M Boutard, T Cerisy, PY Nogue, A Alberti, J Weissenbach, M Salanoubat, ...
PLoS genetics 10 (11), e1004773, 2014
Targeted gene inactivation in Clostridium phytofermentans shows that cellulose degradation requires the family 9 hydrolase Cphy3367
AC Tolonen, AC Chilaka, GM Church
Molecular microbiology 74 (6), 1300-1313, 2009
Invertible promoters mediate bacterial phase variation, antibiotic resistance, and host adaptation in the gut
X Jiang, AB Hall, TD Arthur, DR Plichta, CT Covington, M Poyet, ...
Science 363 (6423), 181-187, 2019
Growth effects of N-acylethanolamines on gut bacteria reflect altered bacterial abundances in inflammatory bowel disease
N Fornelos, EA Franzosa, J Bishai, JW Annand, A Oka, J Lloyd-Price, ...
Nature microbiology 5 (3), 486-497, 2020
Genetic Manipulation of Prochlorococcus Strain MIT9313: Green Fluorescent Protein Expression from an RSF1010 Plasmid and Tn5 Transposition
AC Tolonen, GB Liszt, WR Hess
Applied and environmental microbiology 72 (12), 7607-7613, 2006
Quantitative proteomics using reductive dimethylation for stable isotope labeling
AC Tolonen, W Haas
JoVE (Journal of Visualized Experiments), e51416, 2014
Synthetic glycans control gut microbiome structure and mitigate colitis in mice
AC Tolonen, N Beauchemin, C Bayne, L Li, J Tan, J Lee, BM Meehan, ...
Nature communications 13 (1), 1244, 2022
Dissecting the human microbiome with single-cell genomics
AC Tolonen, RJ Xavier
Genome medicine 9, 1-3, 2017
Fungal lysis by a soil bacterium fermenting cellulose
AC Tolonen, T Cerisy, H El‐Sayyed, M Boutard, M Salanoubat, ...
Environmental microbiology 17 (8), 2618-2627, 2015
Global repositioning of transcription start sites in a plant-fermenting bacterium
M Boutard, L Ettwiller, T Cerisy, A Alberti, K Labadie, M Salanoubat, ...
Nature communications 7 (1), 13783, 2016
Physiology, genomics, and pathway engineering of an ethanol-tolerant strain of Clostridium phytofermentans
AC Tolonen, TR Zuroff, M Ramya, M Boutard, T Cerisy, WR Curtis
Applied and environmental microbiology 81 (16), 5440-5448, 2015
Evolution of a biomass-fermenting bacterium to resist lignin phenolics
T Cerisy, T Souterre, I Torres-Romero, M Boutard, I Dubois, J Patrouix, ...
Applied and Environmental Microbiology 83 (11), e00289-17, 2017
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