Methylobacterium Genome Sequences: A Reference Blueprint to Investigate Microbial Metabolism of C1 Compounds from Natural and Industrial Sources S Vuilleumier, L Chistoserdova, MC Lee, F Bringel, A Lajus, Y Zhou, ... PloS one 4 (5), e5584, 2009 | 269 | 2009 |
Colonization and succession within the human gut microbiome by archaea, bacteria, and microeukaryotes during the first year of life L Wampach, A Heintz-Buschart, A Hogan, EEL Muller, S Narayanasamy, ... Frontiers in microbiology 8, 738, 2017 | 266 | 2017 |
Systematic design of 18S rRNA gene primers for determining eukaryotic diversity in microbial consortia LW Hugerth, EEL Muller, YOO Hu, LAM Lebrun, H Roume, D Lundin, ... PloS one 9 (4), e95567, 2014 | 256 | 2014 |
A hundred years of activated sludge: time for a rethink AR Sheik, EEL Muller, P Wilmes Frontiers in microbiology 5, 47, 2014 | 148 | 2014 |
A year of monitoring 20 mesophilic full-scale bioreactors reveals the existence of stable but different core microbiomes in bio-waste and wastewater anaerobic digestion systems M Calusinska, X Goux, M Fossépré, EEL Muller, P Wilmes, P Delfosse Biotechnology for biofuels 11, 1-19, 2018 | 145 | 2018 |
Ninety-nine de novo assembled genomes from the moose (Alces alces) rumen microbiome provide new insights into microbial plant biomass degradation O Svartström, J Alneberg, N Terrapon, V Lombard, I de Bruijn, J Malmsten, ... The ISME journal 11 (11), 2538-2551, 2017 | 135 | 2017 |
IMP: a pipeline for reproducible reference-independent integrated metagenomic and metatranscriptomic analyses S Narayanasamy, Y Jarosz, EEL Muller, A Heintz-Buschart, M Herold, ... Genome biology 17, 1-21, 2016 | 135 | 2016 |
A biomolecular isolation framework for eco-systems biology H Roume, E El Muller, T Cordes, J Renaut, K Hiller, P Wilmes The ISME journal 7 (1), 110-121, 2013 | 114 | 2013 |
Complete genome sequences of six strains of the genus Methylobacterium CJ Marx, F Bringel, L Chistoserdova, L Moulin, M Farhan Ul Haque, ... Journal of Bacteriology 194 (17), 4746-4748, 2012 | 109 | 2012 |
Comparative integrated omics: identification of key functionalities in microbial community-wide metabolic networks H Roume, A Heintz-Buschart, EEL Muller, P May, VP Satagopam, ... npj Biofilms and Microbiomes 1 (1), 1-11, 2015 | 98 | 2015 |
Lipid-based biofuel production from wastewater EEL Muller, AR Sheik, P Wilmes Current Opinion in Biotechnology 30, 9-16, 2014 | 95 | 2014 |
Condensing the omics fog of microbial communities EEL Muller, E Glaab, P May, N Vlassis, P Wilmes Trends in microbiology 21 (7), 325-333, 2013 | 84 | 2013 |
Using metabolic networks to resolve ecological properties of microbiomes EEL Muller, K Faust, S Widder, M Herold, SM Arbas, P Wilmes Current Opinion in Systems Biology 8, 73-80, 2018 | 82 | 2018 |
Community-integrated omics links dominance of a microbial generalist to fine-tuned resource usage EEL Muller, N Pinel, CC Laczny, MR Hoopmann, S Narayanasamy, ... Nature communications 5 (1), 5603, 2014 | 82 | 2014 |
Integration of time-series meta-omics data reveals how microbial ecosystems respond to disturbance M Herold, S Martínez Arbas, S Narayanasamy, AR Sheik, ... Nature communications 11 (1), 5281, 2020 | 77 | 2020 |
Dichloromethane-degrading bacteria in the genomic age EEL Muller, F Bringel, S Vuilleumier Research in Microbiology 162 (9), 869-876, 2011 | 69 | 2011 |
Sequential isolation of metabolites, RNA, DNA, and proteins from the same unique sample H Roume, A Heintz-Buschart, EEL Muller, P Wilmes Methods in enzymology 531, 219-236, 2013 | 67 | 2013 |
Integrated omics for the identification of key functionalities in biological wastewater treatment microbial communities S Narayanasamy, ME E.L., S Abdul R., W Paul microbial biotechnology, 2015 | 63 | 2015 |
Functional genomics of dichloromethane utilization in Methylobacterium extorquens DM4 EEL Muller, E Hourcade, Y Louhichi‐Jelail, P Hammann, S Vuilleumier, ... Environmental Microbiology 13 (9), 2518-2535, 2011 | 59 | 2011 |
Roles of bacteriophages, plasmids and CRISPR immunity in microbial community dynamics revealed using time-series integrated meta-omics S Martínez Arbas, S Narayanasamy, M Herold, LA Lebrun, ... Nature microbiology 6 (1), 123-135, 2021 | 55 | 2021 |