Brad Nelson
Brad Nelson
Staff Data Scientist, Phase Genomics, Inc.
Verified email at
Cited by
Cited by
An integrated map of structural variation in 2,504 human genomes
PH Sudmant, T Rausch, EJ Gardner, RE Handsaker, A Abyzov, ...
Nature 526 (7571), 75-81, 2015
Multi-platform discovery of haplotype-resolved structural variation in human genomes
MJP Chaisson, AD Sanders, X Zhao, A Malhotra, D Porubsky, T Rausch, ...
Nature communications 10 (1), 1784, 2019
A high-coverage Neandertal genome from Vindija Cave in Croatia
K Prüfer, C De Filippo, S Grote, F Mafessoni, P Korlević, M Hajdinjak, ...
Science 358 (6363), 655-658, 2017
Characterizing the major structural variant alleles of the human genome
PA Audano, A Sulovari, TA Graves-Lindsay, S Cantsilieris, M Sorensen, ...
Cell 176 (3), 663-675. e19, 2019
Global diversity, population stratification, and selection of human copy-number variation
PH Sudmant, S Mallick, BJ Nelson, F Hormozdiari, N Krumm, ...
Science 349 (6253), aab3761, 2015
High-resolution comparative analysis of great ape genomes
ZN Kronenberg, IT Fiddes, D Gordon, S Murali, S Cantsilieris, ...
Science 360 (6393), eaar6343, 2018
Genomic patterns of de novo mutation in simplex autism
TN Turner, BP Coe, DE Dickel, K Hoekzema, BJ Nelson, MC Zody, ...
Cell 171 (3), 710-722. e12, 2017
Genome sequencing of autism-affected families reveals disruption of putative noncoding regulatory DNA
TN Turner, F Hormozdiari, MH Duyzend, SA McClymont, PW Hook, ...
The American Journal of Human Genetics 98 (1), 58-74, 2016
The evolution and population diversity of human-specific segmental duplications
MY Dennis, L Harshman, BJ Nelson, O Penn, S Cantsilieris, J Huddleston, ...
Nature ecology & evolution 1 (3), 0069, 2017
Genome sequencing identifies multiple deleterious variants in autism patients with more severe phenotypes
H Guo, MH Duyzend, BP Coe, C Baker, K Hoekzema, J Gerdts, TN Turner, ...
Genetics in Medicine 21 (7), 1611-1620, 2019
Human-specific tandem repeat expansion and differential gene expression during primate evolution
A Sulovari, R Li, PA Audano, D Porubsky, MR Vollger, GA Logsdon, ...
Proceedings of the National Academy of Sciences 116 (46), 23243-23253, 2019
Model selection as a tool for phylogeographic inference: an example from the willow Salix melanopsis
BC Carstens, RS Brennan, V Chua, CV Duffie, MG Harvey, RA Koch, ...
Molecular Ecology 22 (15), 4014-4028, 2013
Adaptive archaic introgression of copy number variants and the discovery of previously unknown human genes
PH Hsieh, MR Vollger, V Dang, D Porubsky, C Baker, S Cantsilieris, ...
Science 366 (6463), eaax2083, 2019
Evolutionary history and adaptation of a human pygmy population of Flores Island, Indonesia
S Tucci, SH Vohr, RC McCoy, B Vernot, MR Robinson, C Barbieri, ...
Science 361 (6401), 511-516, 2018
Recurrent structural variation, clustered sites of selection, and disease risk for the complement factor H (CFH) gene family
S Cantsilieris, BJ Nelson, J Huddleston, C Baker, L Harshman, K Penewit, ...
Proceedings of the National Academy of Sciences 115 (19), E4433-E4442, 2018
The birth of a human-specific neural gene by incomplete duplication and gene fusion
ML Dougherty, X Nuttle, O Penn, BJ Nelson, J Huddleston, C Baker, ...
Genome biology 18 (1), 1-16, 2017
Interchromosomal core duplicons drive both evolutionary instability and disease susceptibility of the Chromosome 8p23. 1 region
K Mohajeri, S Cantsilieris, J Huddleston, BJ Nelson, BP Coe, ...
Genome Research 26 (11), 1453-1467, 2016
Evaluating summary statistics used to test for incomplete lineage sorting: mito‐nuclear discordance in the reef sponge Callyspongia vaginalis
MB DeBiasse, BJ Nelson, ME Hellberg
Molecular Ecology 23 (1), 225-238, 2014
Deflating trees: improving Bayesian branch-length estimates using informed priors
BJ Nelson, JJ Andersen, JM Brown
Systematic Biology 64 (3), 441-447, 2015
Untangling the influences of unmodeled evolutionary processes on phylogenetic signal in a forensically important HIV-1 transmission cluster
VP Doyle, JJ Andersen, BJ Nelson, ML Metzker, JM Brown
Molecular phylogenetics and evolution 75, 126-137, 2014
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