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John Calarco
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Year
Heritable genome editing in C. elegans via a CRISPR-Cas9 system
AE Friedland, YB Tzur, KM Esvelt, MP Colaiácovo, GM Church, ...
Nature methods 10 (8), 741-743, 2013
11932013
Deciphering the splicing code
Y Barash, JA Calarco, W Gao, Q Pan, X Wang, O Shai, BJ Blencowe, ...
Nature 465 (7294), 53-59, 2010
11432010
Tissue-specific alternative splicing remodels protein-protein interaction networks
JD Ellis, M Barrios-Rodiles, R Colak, M Irimia, TH Kim, JA Calarco, ...
Molecular cell 46 (6), 884-892, 2012
4802012
Determinants of exon 7 splicing in the spinal muscular atrophy genes, SMN1 and SMN2
L Cartegni, ML Hastings, JA Calarco, E De Stanchina, AR Krainer
The American Journal of Human Genetics 78 (1), 63-77, 2006
3902006
Regulation of vertebrate nervous system alternative splicing and development by an SR-related protein
JA Calarco, S Superina, D O'Hanlon, M Gabut, B Raj, Q Pan, U Skalska, ...
Cell 138 (5), 898-910, 2009
2632009
Global analysis of alternative splicing differences between humans and chimpanzees
JA Calarco, Y Xing, M Cáceres, JP Calarco, X Xiao, Q Pan, C Lee, ...
Genes & development 21 (22), 2963-2975, 2007
2042007
Genome-wide analysis of alternative splicing in Caenorhabditis elegans
AK Ramani, JA Calarco, Q Pan, S Mavandadi, Y Wang, AC Nelson, ...
Genome research 21 (2), 342-348, 2011
1992011
Recurrent noncoding U1 snRNA mutations drive cryptic splicing in SHH medulloblastoma
H Suzuki, SA Kumar, S Shuai, A Diaz-Navarro, A Gutierrez-Fernandez, ...
Nature 574 (7780), 707-711, 2019
1762019
Heritable Custom Genomic Modifications in Caenorhabditis elegans via a CRISPR–Cas9 System
YB Tzur, AE Friedland, S Nadarajan, GM Church, JA Calarco, ...
Genetics 195 (3), 1181-1185, 2013
1642013
Role for PSF in mediating transcriptional activator-dependent stimulation of pre-mRNA processing in vivo
E Rosonina, JYY Ip, JA Calarco, MA Bakowski, A Emili, S McCracken, ...
Molecular and cellular biology, 2005
1592005
Emerging roles of alternative pre-mRNA splicing regulation in neuronal development and function
AD Norris, JA Calarco
Frontiers in neuroscience 6, 122, 2012
1192012
Genome-wide CRISPR-Cas9 interrogation of splicing networks reveals a mechanism for recognition of autism-misregulated neuronal microexons
T Gonatopoulos-Pournatzis, M Wu, U Braunschweig, J Roth, H Han, ...
Molecular cell 72 (3), 510-524. e12, 2018
1162018
Efficient Genome Editing in Caenorhabditis elegans with a Toolkit of Dual-Marker Selection Cassettes
AD Norris, HM Kim, MP Colaiácovo, JA Calarco
Genetics 201 (2), 449-458, 2015
992015
Networking in a global world: establishing functional connections between neural splicing regulators and their target transcripts
JA Calarco, M Zhen, BJ Blencowe
Rna 17 (5), 775-791, 2011
962011
Serotonin-dependent kinetics of feeding bursts underlie a graded response to food availability in C. elegans
KS Lee, S Iwanir, RB Kopito, M Scholz, JA Calarco, D Biron, E Levine
Nature communications 8 (1), 14221, 2017
902017
A pair of RNA-binding proteins controls networks of splicing events contributing to specialization of neural cell types
AD Norris, S Gao, ML Norris, D Ray, AK Ramani, AG Fraser, Q Morris, ...
Molecular cell 54 (6), 946-959, 2014
872014
The transcriptional landscape of Shh medulloblastoma
P Skowron, H Farooq, FMG Cavalli, AS Morrissy, M Ly, LD Hendrikse, ...
Nature communications 12 (1), 1749, 2021
772021
Neuroendocrine modulation sustains the C. elegans forward motor state
MA Lim, J Chitturi, V Laskova, J Meng, D Findeis, A Wiekenberg, ...
Elife 5, e19887, 2016
722016
CRISPR-mediated genetic interaction profiling identifies RNA binding proteins controlling metazoan fitness
AD Norris, X Gracida, JA Calarco
Elife 6, e28129, 2017
422017
Technologies for the global discovery and analysis of alternative splicing
JA Calarco, AL Saltzman, JY Ip, BJ Blencowe
Alternative splicing in the postgenomic era, 64-84, 2007
422007
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