Emily B. Hollister
Emily B. Hollister
Director, R&D Computational Biology, Diversigen, Inc
Verified email at
Cited by
Cited by
Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities
PD Schloss, SL Westcott, T Ryabin, JR Hall, M Hartmann, EB Hollister, ...
Applied and environmental microbiology 75 (23), 7537-7541, 2009
Intestinal dysbiosis in preterm infants preceding necrotizing enterocolitis: a systematic review and meta-analysis
M Pammi, J Cope, PI Tarr, BB Warner, AL Morrow, V Mai, KE Gregory, ...
Microbiome 5, 1-15, 2017
Compositional and functional features of the gastrointestinal microbiome and their effects on human health
EB Hollister, C Gao, J Versalovic
Gastroenterology 146 (6), 1449-1458, 2014
A genomic catalog of Earth’s microbiomes
Nature Biotechnology, 2020
Structure and function of the healthy pre-adolescent pediatric gut microbiome
EB Hollister, K Riehle, RA Luna, EM Weidler, M Rubio-Gonzales, ...
Microbiome 3, 1-13, 2015
Randomised clinical trial: gut microbiome biomarkers are associated with clinical response to a low FODMAP diet in children with the irritable bowel syndrome
BP Chumpitazi, JL Cope, EB Hollister, CM Tsai, AR McMeans, RA Luna, ...
Alimentary pharmacology & therapeutics 42 (4), 418-427, 2015
Shifts in microbial community structure along an ecological gradient of hypersaline soils and sediments
EB Hollister, AS Engledow, AJM Hammett, TL Provin, HH Wilkinson, ...
The ISME journal 4 (6), 829-838, 2010
Role of the gut microbiome in obstructive sleep apnea–induced hypertension
DJ Durgan, BP Ganesh, JL Cope, NJ Ajami, SC Phillips, JF Petrosino, ...
Hypertension 67 (2), 469-474, 2016
GABA‐producing Bifidobacterium dentium modulates visceral sensitivity in the intestine
K Pokusaeva, C Johnson, B Luk, G Uribe, Y Fu, N Oezguen, ...
Neurogastroenterology & Motility 29 (1), e12904, 2017
Differences in gut microbial composition correlate with regional brain volumes in irritable bowel syndrome
JS Labus, EB Hollister, J Jacobs, K Kirbach, N Oezguen, A Gupta, ...
Microbiome 5, 1-17, 2017
Black box chimera check (B2C2): a windows-based software for batch depletion of chimeras from bacterial 16S rRNA gene datasets
V Gontcharova, E Youn, RD Wolcott, EB Hollister, TJ Gentry, SE Dowd
The open microbiology journal 4, 47, 2010
Leveraging sequence-based faecal microbial community survey data to identify a composite biomarker for colorectal cancer
MS Shah, TZ DeSantis, T Weinmaier, PJ McMurdie, JL Cope, A Altrichter, ...
Gut 67 (5), 882-891, 2018
Effects of repeated glyphosate applications on soil microbial community composition and the mineralization of glyphosate
SH Lancaster, EB Hollister, SA Senseman, TJ Gentry
Pest Management Science: formerly Pesticide Science 66 (1), 59-64, 2010
Gut microbiota influences low fermentable substrate diet efficacy in children with irritable bowel syndrome
BP Chumpitazi, EB Hollister, N Oezguen, CM Tsai, AR McMeans, ...
Gut microbes 5 (2), 165-175, 2014
Water management impacts on arsenic speciation and iron-reducing bacteria in contrasting rice-rhizosphere compartments
AC Somenahally, EB Hollister, W Yan, TJ Gentry, RH Loeppert
Environmental science & technology 45 (19), 8328-8335, 2011
The airway microbiome of intubated premature infants: characteristics and changes that predict the development of bronchopulmonary dysplasia
P Lohmann, RA Luna, EB Hollister, S Devaraj, TA Mistretta, SE Welty, ...
Pediatric research 76 (3), 294-301, 2014
Human virome and disease: high-throughput sequencing for virus discovery, identification of phage-bacteria dysbiosis and development of therapeutic approaches with emphasis on …
TM Santiago-Rodriguez, EB Hollister
Viruses 11 (7), 656, 2019
From Prediction to Function Using Evolutionary Genomics: Human-Specific Ecotypes of Lactobacillus reuteri Have Diverse Probiotic Functions
JK Spinler, A Sontakke, EB Hollister, SF Venable, PL Oh, MA Balderas, ...
Genome biology and evolution 6 (7), 1772-1789, 2014
Airway microbiome and development of bronchopulmonary dysplasia in preterm infants: a systematic review
M Pammi, CV Lal, BD Wagner, PM Mourani, P Lohmann, RA Luna, ...
The Journal of pediatrics 204, 126-133. e2, 2019
Transfer of viral communities between human individuals during fecal microbiota transplantation
C Chehoud, A Dryga, Y Hwang, D Nagy-Szakal, EB Hollister, RA Luna, ...
MBio 7 (2), 10.1128/mbio. 00322-16, 2016
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