| Metabolic and community synergy of oral bacteria in colorectal cancer KJ Flynn, NT Baxter, PD Schloss Msphere 1 (3), 10.1128/msphere. 00102-16, 2016 | 137 | 2016 |
| On the intrinsic sterility of 3D printing RY Neches, KJ Flynn, L Zaman, E Tung, N Pudlo PeerJ 4, e2661, 2016 | 84 | 2016 |
| Spatial variation of the native colon microbiota in healthy adults KJ Flynn, MT Ruffin IV, DK Turgeon, PD Schloss Cancer Prevention Research 11 (7), 393-402, 2018 | 79 | 2018 |
| Seasonal airway microbiome and transcriptome interactions promote childhood asthma exacerbations KE McCauley, K Flynn, A Calatroni, V DiMassa, B LaMere, DW Fadrosh, ... Journal of Allergy and Clinical Immunology 150 (1), 204-213, 2022 | 46 | 2022 |
| Integrative Conjugative Element ICE-βox Confers Oxidative Stress Resistance to Legionella pneumophila In Vitro and in Macrophages KJ Flynn, MS Swanson MBio 5 (3), 10.1128/mbio. 01091-14, 2014 | 38 | 2014 |
| Deep immune phenotyping reveals similarities between aging, Down syndrome, and autoimmunity K Lambert, KG Moo, A Arnett, G Goel, A Hu, KJ Flynn, C Speake, ... Science translational medicine 14 (627), eabi4888, 2022 | 31 | 2022 |
| The gut bacterial community potentiates Clostridioides difficile infection severity NA Lesniak, AM Schubert, KJ Flynn, JL Leslie, H Sinani, IL Bergin, ... MBio 13 (4), e01183-22, 2022 | 27 | 2022 |
| Microbiome preterm birth DREAM challenge: crowdsourcing machine learning approaches to advance preterm birth research JL Golob, TT Oskotsky, AS Tang, A Roldan, V Chung, CWY Ha, RJ Wong, ... Cell Reports Medicine 5 (1), 2024 | 25 | 2024 |
| Autoreactive T cell receptors with shared germline-like α chains in type 1 diabetes PS Linsley, F Barahmand-pour-Whitman, E Balmas, HA DeBerg, KJ Flynn, ... JCI insight 6 (22), 2021 | 25 | 2021 |
| Inducible expression quantitative trait locus analysis of the MUC5AC gene in asthma in urban populations of children MC Altman, K Flynn, MG Rosasco, M Dapas, M Kattan, S Lovinsky-Desir, ... Journal of Allergy and Clinical Immunology 148 (6), 1505-1514, 2021 | 18 | 2021 |
| csrT Represents a New Class of csrA-Like Regulatory Genes Associated with Integrative Conjugative Elements of Legionella pneumophila ZD Abbott, KJ Flynn, BG Byrne, S Mukherjee, DB Kearns, MS Swanson Journal of Bacteriology 198 (3), 553-564, 2016 | 14 | 2016 |
| Ten simple rules to increase computational skills among biologists with Code Clubs AK Hagan, NA Lesniak, MJ Balunas, L Bishop, WL Close, MD Doherty, ... PLoS computational biology 16 (8), e1008119, 2020 | 12 | 2020 |
| The gut bacterial community potentiates NA Lesniak, AM Schubert, KJ Flynn, JL Leslie, H Sinani, IL Bergin, ... Clostridioides difficile, 01183-22, 2022 | 8 | 2022 |
| The gut bacterial community potentiates Clostridioides difficile infection severity. mBio 13: e0118322 NA Lesniak, AM Schubert, KJ Flynn, JL Leslie, H Sinani, IL Bergin, ... | 7 | 2022 |
| Metabolic and community synergy of oral bacteria in colorectal cancer. mSphere 1: e00102-16 KJ Flynn, NT Baxter, PD Schloss | 7 | 2016 |
| Spatial Variation of the Native Colon Microbiota in Healthy Adults. Cancer Prev Res. 2018; 11: 393–402. doi: 10.1158/1940-6207 KJ Flynn, MT Ruffin, DK Turgeon, PD Schloss CAPR-17-0370, 0 | 7 | |
| The cyclin-dependent kinase 8 (CDK8) inhibitor DCA promotes a tolerogenic chemical immunophenotype in CD4+ T cells via a novel CDK8-GATA3-FOXP3 pathway A Arnett, KG Moo, KJ Flynn, TB Sundberg, L Johannessen, AF Shamji, ... Molecular and cellular biology, 2021 | 5 | 2021 |
| Integrative conjugative element ICE-βox confers oxidative stress resistance to Legionella pneumophila in vitro and in macrophages. mBio 5: e01091–14 KJ Flynn, MS Swanson | 5 | 2014 |
| Machine learning across multiple imaging and biomarker modalities in the UK Biobank improves genetic discovery for liver fat accumulation H Somineni, S Mukherjee, D Amar, J Pei, K Guo, D Light, K Flynn, ... medRxiv, 2024.01. 06.24300923, 2024 | 4 | 2024 |
| The Influence of MUC5AC SNPs on expression of MUC5AC and mucus hypersecretion genes during asthma exacerbations D Jackson, K Flynn, M Rosasco, M Gill, A Liu, R Gruchalla, J Pongracic, ... | 3 | 2020 |
