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Lexiang Ji
Lexiang Ji
Senior Expert I Data Science at Novartis
Verified email at novartis.com - Homepage
Title
Cited by
Cited by
Year
Widespread natural variation of DNA methylation within angiosperms
CE Niederhuth, AJ Bewick, L Ji, MS Alabady, KD Kim, Q Li, NA Rohr, ...
Genome biology 17, 1-19, 2016
4822016
On the origin and evolutionary consequences of gene body DNA methylation
AJ Bewick, L Ji, CE Niederhuth, EM Willing, BT Hofmeister, X Shi, L Wang, ...
Proceedings of the National Academy of Sciences 113 (32), 9111-9116, 2016
2892016
Widespread long-range cis-regulatory elements in the maize genome
WA Ricci, Z Lu, L Ji, AP Marand, CL Ethridge, NG Murphy, JM Noshay, ...
Nature plants 5 (12), 1237-1249, 2019
2642019
Subgenome dominance in an interspecific hybrid, synthetic allopolyploid, and a 140-year-old naturally established neo-allopolyploid monkeyflower
PP Edger, R Smith, MR McKain, AM Cooley, M Vallejo-Marin, Y Yuan, ...
The Plant Cell 29 (9), 2150-2167, 2017
2302017
Genomic distribution of H3K9me2 and DNA methylation in a maize genome
PT West, Q Li, L Ji, SR Eichten, J Song, MW Vaughn, RJ Schmitz, ...
PloS one 9 (8), e105267, 2014
1542014
Maize death acids, 9-lipoxygenase–derived cyclopente (a) nones, display activity as cytotoxic phytoalexins and transcriptional mediators
SA Christensen, A Huffaker, F Kaplan, J Sims, S Ziemann, G Doehlemann, ...
Proceedings of the National Academy of Sciences 112 (36), 11407-11412, 2015
1412015
The evolution of CHROMOMETHYLASES and gene body DNA methylation in plants
AJ Bewick, CE Niederhuth, L Ji, NA Rohr, PT Griffin, J Leebens-Mack, ...
Genome biology 18, 1-13, 2017
1392017
Full-length autonomous transposable elements are preferentially targeted by expression-dependent forms of RNA-directed DNA methylation
K Panda, L Ji, DA Neumann, J Daron, RJ Schmitz, RK Slotkin
Genome biology 17, 1-19, 2016
1352016
The Genome and Methylome of a Beetle with Complex Social Behavior, Nicrophorus vespilloides (Coleoptera: Silphidae)
CB Cunningham, L Ji, RAW Wiberg, J Shelton, EC McKinney, DJ Parker, ...
Genome Biology and Evolution 7 (12), 3383-3396, 2015
1012015
Genome-wide redistribution of H3K27me3 is linked to genotoxic stress and defective growth
EY Basenko, T Sasaki, L Ji, CJ Prybol, RM Burckhardt, RJ Schmitz, ...
Proceedings of the National Academy of Sciences 112 (46), E6339-E6348, 2015
842015
Base-resolution detection of N4-methylcytosine in genomic DNA using 4mC-Tet-assisted-bisulfite- sequencing
M Yu, L Ji, DA Neumann, D Chung, J Groom, J Westpheling, C He, ...
Nucleic acids research 43 (21), e148-e148, 2015
792015
Methylated DNA is over-represented in whole-genome bisulfite sequencing data
L Ji, T Sasaki, X Sun, P Ma, ZA Lewis, RJ Schmitz
Frontiers in genetics 5, 341, 2014
792014
Nociceptor neurons affect cancer immunosurveillance
M Balood, M Ahmadi, T Eichwald, A Ahmadi, A Majdoubi, K Roversi, ...
Nature 611 (7935), 405-412, 2022
772022
Multiple genes recruited from hormone pathways partition maize diterpenoid defences
Y Ding, KM Murphy, E Poretsky, S Mafu, B Yang, SN Char, ...
Nature Plants 5 (10), 1043-1056, 2019
682019
Epimutations are associated with CHROMOMETHYLASE 3-induced de novo DNA methylation
JM Wendte, Y Zhang, L Ji, X Shi, RR Hazarika, Y Shahryary, F Johannes, ...
elife 8, e47891, 2019
662019
Identification and characterization of the Populus sucrose synthase gene family
X An, Z Chen, J Wang, M Ye, L Ji, J Wang, W Liao, H Ma
Gene 539 (1), 58-67, 2014
632014
Genome-wide reinforcement of DNA methylation occurs during somatic embryogenesis in soybean
L Ji, SM Mathioni, S Johnson, D Tucker, AJ Bewick, K Do Kim, J Daron, ...
The Plant Cell 31 (10), 2315-2331, 2019
602019
Natural variation in DNA methylation homeostasis and the emergence of epialleles
Y Zhang, JM Wendte, L Ji, RJ Schmitz
Proceedings of the National Academy of Sciences 117 (9), 4874-4884, 2020
592020
Crop epigenomics: identifying, unlocking, and harnessing cryptic variation in crop genomes
L Ji, DA Neumann, RJ Schmitz
Molecular plant 8 (6), 860-870, 2015
582015
Monitoring the interplay between transposable element families and DNA methylation in maize
JM Noshay, SN Anderson, P Zhou, L Ji, W Ricci, Z Lu, MC Stitzer, ...
PLoS genetics 15 (9), e1008291, 2019
572019
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