Thomas M. Schmidt
Cited by
Cited by
Structure, function and diversity of the healthy human microbiome
HMP Consortium
Nature 486 (7402), 207-214, 2012
The RDP (ribosomal database project) continues
BL Maidak, JR Cole, TG Lilburn, CT Parker Jr, PR Saxman, JM Stredwick, ...
Nucleic acids research 28 (1), 173-174, 2000
A framework for human microbiome research
Nature 486 (7402), 215-221, 2012
The Ribosomal Database Project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy
JR Cole, B Chai, TL Marsh, RJ Farris, Q Wang, SA Kulam, S Chandra, ...
Nucleic acids research 31 (1), 442-443, 2003
Fundamentals of microbial community resistance and resilience
A Shade, H Peter, SD Allison, DL Baho, M Berga, H Bürgmann, DH Huber, ...
Frontiers in microbiology 3, 417, 2012
Identification of the uncultured bacillus of Whipple’s disease
DA Relman, TM Schmidt, RP MacDermott, S Falkow
New England journal of medicine 327 (5), 293-301, 1992
Decreased Diversity of the Fecal Microbiome in Recurrent Clostridium difficile—Associated Diarrhea
JY Chang, DA Antonopoulos, A Kalra, A Tonelli, WT Khalife, TM Schmidt, ...
The Journal of infectious diseases 197 (3), 435-438, 2008
rRNA operon copy number reflects ecological strategies of bacteria
JA Klappenbach, JM Dunbar, TM Schmidt
Applied and environmental microbiology 66 (4), 1328-1333, 2000
rrndb: the ribosomal RNA operon copy number database
JA Klappenbach, PR Saxman, JR Cole, TM Schmidt
Nucleic acids research 29 (1), 181-184, 2001
Analysis of a marine picoplankton community by 16S rRNA gene cloning and sequencing
TM Schmidt, EF DeLong, NR Pace
Journal of bacteriology 173 (14), 4371-4378, 1991
The agent of bacillary angiomatosis: an approach to the identification of uncultured pathogens
DA Relman, JS Loutit, TM Schmidt, S Falkow, LS Tompkins
New England journal of medicine 323 (23), 1573-1580, 1990
A new version of the RDP (Ribosomal Database Project)
BL Maidak, JR Cole, CT Parker Jr, GM Garrity, N Larsen, B Li, TG Lilburn, ...
Nucleic acids research 27 (1), 171-173, 1999
rrnDB: improved tools for interpreting rRNA gene abundance in bacteria and archaea and a new foundation for future development
SF Stoddard, BJ Smith, R Hein, BRK Roller, TM Schmidt
Nucleic acids research 43 (D1), D593-D598, 2015
Comparison of the respiratory microbiome in healthy nonsmokers and smokers
A Morris, JM Beck, PD Schloss, TB Campbell, K Crothers, JL Curtis, ...
American journal of respiratory and critical care medicine 187 (10), 1067-1075, 2013
Analysis of the upper respiratory tract microbiotas as the source of the lung and gastric microbiotas in healthy individuals
CM Bassis, JR Erb-Downward, RP Dickson, CM Freeman, TM Schmidt, ...
MBio 6 (2), 10.1128/mbio. 00037-15, 2015
Reproducible community dynamics of the gastrointestinal microbiota following antibiotic perturbation
DA Antonopoulos, SM Huse, HG Morrison, TM Schmidt, ML Sogin, ...
Infection and immunity 77 (6), 2367-2375, 2009
Gut microbiome–derived metabolites modulate intestinal epithelial cell damage and mitigate graft-versus-host disease
ND Mathewson
Nature Immunology 17, 505-513, 2016
Natural endophytic association between Rhizobium leguminosarum bv. trifolii and rice roots and assessment of its potential to promote rice growth
YG Yanni, RY Rizk, V Corich, A Squartini, K Ninke, S Philip-Hollingsworth, ...
Opportunities for Biological Nitrogen Fixation in Rice and Other Non-Legumes …, 1997
Dynamics of human gut microbiota and short-chain fatty acids in response to dietary interventions with three fermentable fibers
NT Baxter, AW Schmidt, A Venkataraman, KS Kim, C Waldron, ...
MBio 10 (1), 10.1128/mbio. 02566-18, 2019
Systematic artifacts in metagenomes from complex microbial communities
V Gomez-Alvarez, TK Teal, TM Schmidt
The ISME journal 3 (11), 1314-1317, 2009
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