Severe COVID-19 is marked by a dysregulated myeloid cell compartment J Schulte-Schrepping, N Reusch, D Paclik, K Baßler, S Schlickeiser, ... Cell 182 (6), 1419-1440. e23, 2020 | 1415 | 2020 |
Benchmarking atlas-level data integration in single-cell genomics MD Luecken, M Büttner, K Chaichoompu, A Danese, M Interlandi, ... Nature methods 19 (1), 41-50, 2022 | 844 | 2022 |
Swarm learning for decentralized and confidential clinical machine learning S Warnat-Herresthal, H Schultze, KL Shastry, S Manamohan, ... Nature 594 (7862), 265-270, 2021 | 747 | 2021 |
Mapping the epigenetic basis of complex traits S Cortijo, R Wardenaar, M Colomé-Tatché, A Gilly, M Etcheverry, ... Science 343, 1145-1148, 2014 | 519 | 2014 |
Rate, spectrum, and evolutionary dynamics of spontaneous epimutations JF Van der Graaf A, Wardenaar R, Neumann DA, Taudt A, Shaw RG, Jansen RC ... Proceedings of the National Academy of Sciences USA, 2015 | 371* | 2015 |
Ecological plant epigenetics: Evidence from model and non‐model species, and the way forward CL Richards, C Alonso, C Becker, O Bossdorf, E Bucher, ... Ecology letters 20 (12), 1576-1590, 2017 | 326 | 2017 |
Widespread long-range cis-regulatory elements in the maize genome WA Ricci, Z Lu, L Ji, AP Marand, CL Ethridge, NG Murphy, JM Noshay, ... Nature plants 5 (12), 1237-1249, 2019 | 309 | 2019 |
Single-cell sequencing reveals karyotype heterogeneity in murine and human malignancies B Bakker, A Taudt, ME Belderbos, D Porubsky, DCJ Spierings, ... Genome biology 17, 1-15, 2016 | 261 | 2016 |
Disease severity-specific neutrophil signatures in blood transcriptomes stratify COVID-19 patients AC Aschenbrenner, M Mouktaroudi, B Krämer, M Oestreich, N Antonakos, ... Genome medicine 13, 1-25, 2021 | 257 | 2021 |
Early IFN-α signatures and persistent dysfunction are distinguishing features of NK cells in severe COVID-19 B Krämer, R Knoll, L Bonaguro, M ToVinh, J Raabe, ... Immunity 54 (11), 2650-2669. e14, 2021 | 211 | 2021 |
Histone propionylation is a mark of active chromatin AF Kebede, A Nieborak, LZ Shahidian, S Le Gras, F Richter, DA Gomez, ... Nature structural & molecular biology 24 (12), 1048-1056, 2017 | 197 | 2017 |
Genetic sources of population epigenomic variation A Taudt, M Colomé-Tatché, F Johannes Nature reviews genetics 17, 319, 2016 | 183 | 2016 |
Features of the Arabidopsis recombination landscape resulting from the combined loss of sequence variation and DNA methylation M Colomé-Tatché, S Cortijo, R Wardenaar, L Morgado, B Lahouze, ... Proceedings of the National Academy of Sciences 109 (40), 16240-16245, 2012 | 171 | 2012 |
Single-cell whole genome sequencing reveals no evidence for common aneuploidy in normal and Alzheimer’s disease neurons H van den Bos, DCJ Spierings, A Taudt, B Bakker, D Porubský, ... Genome biology 17, 1-9, 2016 | 165 | 2016 |
MLL2 conveys transcription-independent H3K4 trimethylation in oocytes CW Hanna, A Taudt, J Huang, L Gahurova, A Kranz, S Andrews, W Dean, ... Nature structural & molecular biology 25 (1), 73-82, 2018 | 160 | 2018 |
Genome-wide epigenetic perturbation jump-starts patterns of heritable variation found in nature F Roux, M Colomé-Tatché, C Edelist, R Wardenaar, P Guerche, ... Genetics 188 (4), 1015-1017, 2011 | 129 | 2011 |
A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa BT Hofmeister, J Denkena, M Colomé-Tatché, Y Shahryary, R Hazarika, ... Genome Biology 21, 1-27, 2020 | 110 | 2020 |
EpiScanpy: integrated single-cell epigenomic analysis A Danese, ML Richter, K Chaichoompu, DS Fischer, FJ Theis, ... Nature Communications 12 (1), 5228, 2021 | 98 | 2021 |
Statistical single cell multi-omics integration M Colomé-Tatché, FJ Theis Current Opinion in Systems Biology 7, 54-59, 2018 | 84 | 2018 |
Quantitative epigenetics through epigenomic perturbation of isogenic lines F Johannes, M Colomé-Tatché Genetics 188 (1), 215-227, 2011 | 82 | 2011 |