Gergely J, Szöllősi

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Vincent DaubincnrsVerified email at univ-lyon1.fr
Bastien BoussauLBBE, UMR 5558, CNRS researcher, Université de LyonVerified email at univ-lyon1.fr
Tom A. WilliamsAssociate Professor in Molecular Evolution, University of BristolVerified email at bristol.ac.uk
Eric TannierInria, IXXI, ENS Lyon, Univ LyonVerified email at inria.fr
Adrián A. DavínPostdoctoral fellowVerified email at uq.edu.au
Imre DerenyiDepartment of Biological Physics, Eotvos University, HungaryVerified email at elte.hu
Anja SpangResearch Leader at Royal Netherlands Institute for Sea Research (NIOZ), MMBVerified email at nioz.nl
Dominik SchrempfDept. Biological Physics, Eötvös Loránd University, Budapest, HungaryVerified email at caesar.elte.hu
Lénárd L. SzánthóEötvös University, ELTEVerified email at ttk.elte.hu
Celine ScornavaccaInstitut des Sciences de l'Evolution, MontpellierVerified email at umontpellier.fr
Peter G. FosterNatural History Museum, LondonVerified email at nhm.ac.uk
Martin EmbleyProfessor of Molecular Evolution, Newcastle UniversityVerified email at ncl.ac.uk
Manolo GouyLaboratory of Biometry and Evolutionary Biology, CNRS, LyonVerified email at univ-lyon1.fr
Benoit MorelHeidelberg Institute of Theoretical StudiesVerified email at h-its.org
Alexandros StamatakisFoundation for Research and Technology - Hellas, HITS gGmbH, KITVerified email at ics.forth.gr
Philip HugenholtzAustralian Centre for Ecogenomics, SCMB, The University of QueenslandVerified email at uq.edu.au
Tara A. MahendrarajahRoyal Netherlands Institute for Sea ResearchVerified email at nioz.nl
Philip C. J. DonoghueProfessor of Palaeobiology, University of Bristol, School of Earth SciencesVerified email at bristol.ac.uk
David SelmecziSoftware developer, Semilab, BudapestVerified email at semilab.hu
Vincent BerryLIRMM, Université Montpellier - CNRSVerified email at lirmm.fr

Gergely J, Szöllősi

Other namesGJ, Szöllősi, GJ, Szollosi, Gergely J, Szollosi

Okinawa Institute of Science and Technology, OIST, Eötvös University, ELTE, HUN-REN ÖK ETI

Verified email at oist.jp - Homepage

tree of life somatic evolution evolutionary biology bioinformatics theoretical biology


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Phase transition in the collective migration of tissue cells: experiment and model B Szabo, GJ Szöllösi, B Gönci, Z Jurányi, D Selmeczi, T Vicsek Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 74 (6 …, 2006	584	2006
Damage and fluctuations induce loops in optimal transport networks E Katifori, GJ Szöllősi, MO Magnasco Physical review letters 104 (4), 048704, 2010	401	2010
Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits S Miyauchi, E Kiss, A Kuo, E Drula, A Kohler, M Sánchez-García, E Morin, ... Nature communications 11 (1), 5125, 2020	339	2020
Genome-scale coestimation of species and gene trees B Boussau, GJ Szöllősi, L Duret, M Gouy, E Tannier, V Daubin Genome research 23 (2), 323-330, 2013	307	2013
The inference of gene trees with species trees GJ Szöllősi, E Tannier, V Daubin, B Boussau Systematic biology 64 (1), e42-e62, 2015	281	2015
Megaphylogeny resolves global patterns of mushroom evolution T Varga, K Krizsán, C Földi, B Dima, M Sánchez-García, ... Nature ecology & evolution 3 (4), 668-678, 2019	263	2019
Integrative modeling of gene and genome evolution roots the archaeal tree of life TA Williams, GJ Szöllősi, A Spang, PG Foster, SE Heaps, B Boussau, ... Proceedings of the National Academy of Sciences 114 (23), E4602-E4611, 2017	242	2017
Phylogenomics provides robust support for a two-domains tree of life TA Williams, CJ Cox, PG Foster, GJ Szöllősi, TM Embley Nature ecology & evolution 4 (1), 138-147, 2020	222	2020
Efficient exploration of the space of reconciled gene trees GJ Szöllősi, W Rosikiewicz, B Boussau, E Tannier, V Daubin Systematic biology 62 (6), 901-912, 2013	215	2013
Phylogenetic modeling of lateral gene transfer reconstructs the pattern and relative timing of speciations GJ Szöllősi, B Boussau, SS Abby, E Tannier, V Daubin Proceedings of the national academy of sciences 109 (43), 17513-17518, 2012	194	2012
An efficient algorithm for gene/species trees parsimonious reconciliation with losses, duplications and transfers JP Doyon, C Scornavacca, KY Gorbunov, GJ Szöllősi, V Ranwez, V Berry Comparative Genomics: International Workshop, RECOMB-CG 2010, Ottawa, Canada …, 2010	193	2010
A rooted phylogeny resolves early bacterial evolution GA Coleman, AA Davín, TA Mahendrarajah, LL Szánthó, A Spang, ... Science 372 (6542), eabe0511, 2021	185	2021
Horizontal gene transfer and the history of life V Daubin, GJ Szöllősi Cold Spring Harbor perspectives in biology 8 (4), a018036, 2016	153	2016
Lateral gene transfer from the dead GJ Szöllősi, E Tannier, N Lartillot, V Daubin Systematic biology 62 (3), 386-397, 2013	133	2013
Emergent neutrality in adaptive asexual evolution S Schiffels, GJ Szöllősi, V Mustonen, M Lässig Genetics 189 (4), 1361-1375, 2011	130	2011
GeneRax: a tool for species-tree-aware maximum likelihood-based gene family tree inference under gene duplication, transfer, and loss B Morel, AM Kozlov, A Stamatakis, GJ Szöllősi Molecular biology and evolution 37 (9), 2763-2774, 2020	115	2020
ecceTERA: comprehensive gene tree-species tree reconciliation using parsimony E Jacox, C Chauve, GJ Szöllősi, Y Ponty, C Scornavacca Bioinformatics 32 (13), 2056-2058, 2016	110	2016
Divergent evolutionary trajectories of bryophytes and tracheophytes from a complex common ancestor of land plants BJ Harris, JW Clark, D Schrempf, GJ Szöllősi, PCJ Donoghue, ... Nature Ecology & Evolution 6 (11), 1634-1643, 2022	100	2022
How Long Does Wolbachia Remain on Board? M Bailly-Bechet, P Martins-Simões, GJ Szöllősi, G Mialdea, MF Sagot, ... Molecular Biology and Evolution 34 (5), 1183-1193, 2017	99	2017
Genome-scale phylogenetic analysis finds extensive gene transfer among fungi GJ Szöllősi, AA Davín, E Tannier, V Daubin, B Boussau Philosophical Transactions of the Royal Society B: Biological Sciences 370 …, 2015	99	2015

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