Ana Caicedo
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One thousand plant transcriptomes and the phylogenomics of green plants
Nature 574 (7780), 679-685, 2019
Genome-wide patterns of nucleotide polymorphism in domesticated rice
AL Caicedo, SH Williamson, RD Hernandez, A Boyko, A Fledel-Alon, ...
PLoS genetics 3 (9), e163, 2007
Major impacts of widespread structural variation on gene expression and crop improvement in tomato
M Alonge, X Wang, M Benoit, S Soyk, L Pereira, L Zhang, H Suresh, ...
Cell 182 (1), 145-161. e23, 2020
Epistatic interaction between Arabidopsis FRI and FLC flowering time genes generates a latitudinal cline in a life history trait
AL Caicedo, JR Stinchcombe, KM Olsen, J Schmitt, MD Purugganan
Proceedings of the National Academy of Sciences 101 (44), 15670-15675, 2004
The Extent of Linkage Disequilibrium in Rice (Oryza sativa L.)
KA Mather, AL Caicedo, NR Polato, KM Olsen, S McCouch, ...
Genetics 177 (4), 2223-2232, 2007
Brachypodium as a model for the grasses: today and the future
J Brkljacic, E Grotewold, R Scholl, T Mockler, DF Garvin, P Vain, T Brutnell, ...
Plant physiology 157 (1), 3-13, 2011
Selection Under Domestication: Evidence for a Sweep in the Rice Waxy Genomic Region
KM Olsen, AL Caicedo, N Polato, A McClung, S McCouch, ...
Genetics 173 (2), 975-983, 2006
Extensive gene content variation in the Brachypodium distachyon pan-genome correlates with population structure
SP Gordon, B Contreras-Moreira, DP Woods, DL Des Marais, D Burgess, ...
Nature communications 8 (1), 2184, 2017
Fitness Effects Associated with the Major Flowering Time Gene FRIGIDA in Arabidopsis thaliana in the Field
TM Korves, KJ Schmid, AL Caicedo, C Mays, JR Stinchcombe, ...
The American Naturalist 169 (5), E141-E157, 2007
Diversity and molecular evolution of the RPS2 resistance gene in Arabidopsis thaliana
AL Caicedo, BA Schaal, BN Kunkel
Proceedings of the National Academy of Sciences 96 (1), 302-306, 1999
The red queen in the corn: agricultural weeds as models of rapid adaptive evolution
CC Vigueira, KM Olsen, AL Caicedo
Heredity 110 (4), 303-311, 2013
Signatures of adaptation in the weedy rice genome
LF Li, YL Li, Y Jia, AL Caicedo, KM Olsen
Nature genetics 49 (5), 811-814, 2017
Population structure and phylogeography of Solanum pimpinellifolium inferred from a nuclear gene
AL Caicedo, BA Schaal
Molecular Ecology 13 (7), 1871-1882, 2004
Genomic evidence for complex domestication history of the cultivated tomato in Latin America
H Razifard, A Ramos, AL Della Valle, C Bodary, E Goetz, EJ Manser, X Li, ...
Molecular biology and evolution 37 (4), 1118-1132, 2020
Molecular evolution of shattering loci in US weedy rice
CS Thurber, M Reagon, BL Gross, KM Olsen, Y Jia, AL Caicedo
Molecular ecology 19 (16), 3271-3284, 2010
Weedy (red) rice: an emerging constraint to global rice production
LH Ziska, DR Gealy, N Burgos, AL Caicedo, J Gressel, AL Lawton-Rauh, ...
Advances in agronomy 129, 181-228, 2015
Genomic patterns of nucleotide diversity in divergent populations of US weedy rice
M Reagon, CS Thurber, BL Gross, KM Olsen, Y Jia, AL Caicedo
BMC Evolutionary Biology 10 (1), 1-16, 2010
AFLP Fingerprinting of Phaseolus lunatus L. and Related Wild Species from South America
AL Caicedo, E Gaitán, MC Duque, OT Chica, DG Debouck, J Tohme
Crop Science 39 (5), 1497-1507, 1999
Darwinian selection on a selfing locus
KK Shimizu, JM Cork, AL Caicedo, CA Mays, RC Moore, KM Olsen, ...
Science 306 (5704), 2081-2084, 2004
JA Labate, S Grandillo, T Fulton, S Muños, AL Caicedo, I Peralta, Y Ji, ...
Vegetables, 1-125, 2007
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Articles 1–20