| Reconstructing the early evolution of Fungi using a six-gene phylogeny TY James, F Kauff, CL Schoch, PB Matheny, V Hofstetter, CJ Cox, G Celio, ... Nature 443 (7113), 818-822, 2006 | 2084 | 2006 |
| The Bioperl toolkit: Perl modules for the life sciences JE Stajich, D Block, K Boulez, SE Brenner, SA Chervitz, C Dagdigian, ... Genome research 12 (10), 1611-1618, 2002 | 1957 | 2002 |
| The generic genome browser: a building block for a model organism system database LD Stein, C Mungall, SQ Shu, M Caudy, M Mangone, A Day, E Nickerson, ... Genome research 12 (10), 1599-1610, 2002 | 1342 | 2002 |
| Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis J Kämper, R Kahmann, M Bölker, LJ Ma, T Brefort, BJ Saville, F Banuett, ... Nature 444 (7115), 97-101, 2006 | 1335 | 2006 |
| A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data JW Spatafora, Y Chang, GL Benny, K Lazarus, ME Smith, ML Berbee, ... Mycologia 108 (5), 1028-1046, 2016 | 1184 | 2016 |
| The Genome Sequence of Caenorhabditis briggsae: A Platform for Comparative Genomics LD Stein, Z Bao, D Blasiar, T Blumenthal, MR Brent, N Chen, A Chinwalla, ... PLoS biology 1 (2), e45, 2003 | 1102 | 2003 |
| The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis F Martin, A Aerts, D Ahrén, A Brun, EGJ Danchin, F Duchaussoy, J Gibon, ... Nature 452 (7183), 88-92, 2008 | 1093 | 2008 |
| A fungal phylogeny based on 42 complete genomes derived from supertree and combined gene analysis DA Fitzpatrick, ME Logue, JE Stajich, G Butler BMC evolutionary biology 6 (1), 99, 2006 | 611 | 2006 |
| Same-sex mating and the origin of the Vancouver Island Cryptococcus gattii outbreak JA Fraser, SS Giles, EC Wenink, SG Geunes-Boyer, JR Wright, ... Nature 437 (7063), 1360-1364, 2005 | 602 | 2005 |
| Genome sequence of the model mushroom Schizophyllum commune RA Ohm, JF De Jong, LG Lugones, A Aerts, E Kothe, JE Stajich, ... Nature biotechnology 28 (9), 957-963, 2010 | 587 | 2010 |
| Ganglioside-induced differentiation-associated protein-1 is mutant in Charcot-Marie-Tooth disease type 4A/8q21 RV Baxter, KB Othmane, JM Rochelle, JE Stajich, C Hulette, ... Nature genetics 30 (1), 21, 2002 | 544* | 2002 |
| Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus) JE Stajich, SK Wilke, D Ahrén, CH Au, BW Birren, M Borodovsky, C Burns, ... Proceedings of the National Academy of Sciences 107 (26), 11889-11894, 2010 | 469 | 2010 |
| Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire CA Lévesque, H Brouwer, L Cano, JP Hamilton, C Holt, E Huitema, ... Genome biology 11 (7), R73, 2010 | 418 | 2010 |
| The fungi JE Stajich, ML Berbee, M Blackwell, DS Hibbett, TY James, JW Spatafora, ... Current Biology 19 (18), R840-R845, 2009 | 398 | 2009 |
| Analysis of the genome and transcriptome of Cryptococcus neoformans var. grubii reveals complex RNA expression and microevolution leading to virulence attenuation G Janbon, KL Ormerod, D Paulet, EJ Byrnes III, V Yadav, G Chatterjee, ... PLoS genetics 10 (4), e1004261, 2014 | 372 | 2014 |
| The evolution of mammalian gene families JP Demuth, TD Bie, JE Stajich, N Cristianini, MW Hahn PloS one 1 (1), e85, 2006 | 370 | 2006 |
| Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives TJ Sharpton, JE Stajich, SD Rounsley, MJ Gardner, JR Wortman, ... Genome Research 19 (10), 1722-1731, 2009 | 347 | 2009 |
| FungiDB: an integrated functional genomics database for fungi JE Stajich, T Harris, BP Brunk, J Brestelli, S Fischer, OS Harb, ... Nucleic acids research 40 (D1), D675-D681, 2012 | 337 | 2012 |
| Shared signatures of parasitism and phylogenomics unite cryptomycota and microsporidia TY James, A Pelin, L Bonen, S Ahrendt, D Sain, N Corradi, JE Stajich Current Biology 23 (16), 1548-1553, 2013 | 327 | 2013 |
| Complex history of the amphibian-killing chytrid fungus revealed with genome resequencing data EB Rosenblum, TY James, KR Zamudio, TJ Poorten, D Ilut, D Rodriguez, ... Proceedings of the National Academy of Sciences 110 (23), 9385-9390, 2013 | 316 | 2013 |
Joseph W. SpataforaOregon State UniversityVerified email at science.oregonstate.edu
