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Weijia Su
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Benchmarking transposable element annotation methods for creation of a streamlined, comprehensive pipeline
S Ou, W Su, Y Liao, K Chougule, JRA Agda, AJ Hellinga, CSB Lugo, ...
Genome biology 20 (1), 1-18, 2019
6682019
TIR-Learner, a new ensemble method for TIR transposable element annotation, provides evidence for abundant new transposable elements in the maize genome
W Su, X Gu, T Peterson
Molecular plant 12 (3), 447-460, 2019
982019
A tutorial of EDTA: extensive de novo TE annotator
W Su, S Ou, MB Hufford, T Peterson
Plant Transposable Elements: Methods and Protocols, 55-67, 2021
242021
Retrotransposons hijack alt-EJ for DNA replication and eccDNA biogenesis
F Yang, W Su, OW Chung, L Tracy, L Wang, DA Ramsden, ZZZ Zhang
Nature 620 (7972), 218-225, 2023
162023
Retrotransposon activation during Drosophila metamorphosis conditions adult antiviral responses
L Wang, L Tracy, W Su, F Yang, Y Feng, N Silverman, ZZZ Zhang
Nature genetics 54 (12), 1933-1945, 2022
122022
Ectopic expression of a maize gene is induced by composite insertions generated through alternative transposition
W Su, T Zuo, T Peterson
Genetics 216 (4), 1039-1049, 2020
102020
Evolutionary impacts of alternative transposition
W Su, SP Sharma, T Peterson
Origin and evolution of biodiversity, 113-130, 2018
102018
Author Correction: Benchmarking transposable element annotation methods for creation of a streamlined, comprehensive pipeline
S Ou, W Su, Y Liao, K Chougule, JRA Agda, AJ Hellinga, CSB Lugo, ...
Genome biology 23, 2022
8*2022
CanDriS: posterior profiling of cancer-driving sites based on two-component evolutionary model
W Zhao, J Yang, J Wu, G Cai, Y Zhang, J Haltom, W Su, MJ Dong, S Chen, ...
Briefings in Bioinformatics 22 (5), bbab131, 2021
62021
‘parasites’ hijack a DNA-repair pathway to form circular DNA
F Yang, W Su
Nature 6327, 7, 2023
2023
Retrotransposons hijack alt-EJ DNA repair process for mobilization and eccDNA biogenesis
F Yang, W Su, OW Chung, L Tracy, L Wang, DA Ramsden, ZZZ Zhang
bioRxiv, 2022.09. 25.509424, 2022
2022
The impact of Terminal Inverted Repeat (TIR) transposable elements on plant genomes
W Su
Iowa State University, 2020
2020
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Articles 1–12