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Broňa Brejová
Broňa Brejová
Dept. of Computer Science, Comenius University in Bratislava, Slovakia
Verified email at fmph.uniba.sk - Homepage
Title
Cited by
Cited by
Year
Comparative and demographic analysis of orang-utan genomes
DP Locke, LDW Hillier, WC Warren, KC Worley, LV Nazareth, DM Muzny, ...
Nature 469 (7331), 529-533, 2011
6862011
The Schistosoma japonicum genome reveals features of host–parasite interplay
Functional genomics analysis Liu Feng 1 2 Hu Wei 7 Wang Zhi-Qin 1 Zhang Qin ...
Nature 460 (7253), 345-351, 2009
5532009
The genome of the hydatid tapeworm Echinococcus granulosus
H Zheng, W Zhang, L Zhang, Z Zhang, J Li, G Lu, Y Zhu, Y Wang, ...
Nature genetics 45 (10), 1168-1175, 2013
3482013
DeepNano: deep recurrent neural networks for base calling in MinION nanopore reads
V Boža, B Brejová, T Vinař
PloS one 12 (6), e0178751, 2017
2602017
The common marmoset genome provides insight into primate biology and evolution
TMG Sequencing, Analysis Consortium
Nature genetics 46 (8), 850, 2014
2022014
The completion of the mammalian gene collection (MGC)
G Temple, DS Gerhard, R Rasooly, EA Feingold, PJ Good, C Robinson, ...
Genome research 19 (12), 2324-2333, 2009
1552009
Optimal spaced seeds for homologous coding regions
B Brejová, DG Brown, T Vinař
Journal of Bioinformatics and Computational Biology 1 (04), 595-610, 2004
882004
Evolution of linear chromosomes and multipartite genomes in yeast mitochondria
M Valach, Z Farkas, D Fricova, J Kovac, B Brejova, T Vinar, I Pfeiffer, ...
Nucleic acids research 39 (10), 4202-4219, 2011
872011
Vector seeds: An extension to spaced seeds
B Brejová, DG Brown, T Vinař
Journal of Computer and System Sciences 70 (3), 364-380, 2005
752005
ExonHunter: a comprehensive approach to gene finding
B Brejová, DG Brown, M Li, T Vinař
Bioinformatics 21 (suppl_1), i57-i65, 2005
732005
Finding patterns in biological sequences
B Brejová, C DiMarco, T Vinar, SR Hidalgo, G Holguin, C Patten
Unpublished project report for CS798G, University of Waterloo, Fall, 2000
732000
Massive programmed translational jumping in mitochondria
BF Lang, M Jakubkova, E Hegedusova, R Daoud, L Forget, B Brejova, ...
Proceedings of the National Academy of Sciences 111 (16), 5926-5931, 2014
702014
Targeted discovery of novel human exons by comparative genomics
A Siepel, M Diekhans, B Brejová, L Langton, M Stevens, CLG Comstock, ...
Genome research 17 (12), 1763-1773, 2007
612007
Sequencing the genome of Marssonina brunnea reveals fungus-poplar co-evolution
S Zhu, YZ Cao, C Jiang, BY Tan, Z Wang, S Feng, L Zhang, XH Su, ...
BMC genomics 13 (1), 1-10, 2012
602012
Vector seeds: an extension to spaced seeds allows substantial improvements in sensitivity and specificity
B Brejová, DG Brown, T Vinař
Algorithms in Bioinformatics: Third International Workshop, WABI 2003 …, 2003
602003
Optimal arrangement of leaves in the tree representing hierarchical clustering of gene expression data
T Biedl, B Brejová, ED Demaine, AM Hamel, T Vinar
University of Waterloo, Canada, 2001
462001
A draft genome sequence of the elusive giant squid, Architeuthis dux
RR Da Fonseca, A Couto, AM Machado, B Brejova, CB Albertin, F Silva, ...
GigaScience 9 (1), giz152, 2020
412020
On-line Viterbi algorithm for analysis of long biological sequences
R Šrámek, B Brejová, T Vinař
Algorithms in Bioinformatics: 7th International Workshop, WABI 2007 …, 2007
39*2007
Optimal spaced seeds for Hidden Markov Models, with application to homologous coding regions
B Brejová, DG Brown, T Vinař
Annual Symposium on Combinatorial Pattern Matching, 42-54, 2003
392003
The most probable annotation problem in HMMs and its application to bioinformatics
B Brejová, DG Brown, T Vinař
Journal of Computer and System Sciences 73 (7), 1060-1077, 2007
342007
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