Bryan Brancotte
Bryan Brancotte
Institut Pasteur – Hub de Bioinformatique et Biostatistique – Département Biologie Computationnelle
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Cited by
Cited by
Similarity search for scientific workflows
J Starlinger, B Brancotte, S Cohen-Boulakia, U Leser
Proceedings of the VLDB Endowment (PVLDB) 7 (12), 1143-1154, 2014
Rank aggregation with ties: Experiments and analysis
B Brancotte, B Yang, G Blin, S Cohen-Boulakia, A Denise, S Hamel
Proceedings of the VLDB Endowment (PVLDB) 8 (11), 1202-1213, 2015
Viral Host Range database, an online tool for recording, analyzing and disseminating virus–host interactions
Q Lamy-Besnier, B Brancotte, H Ménager, L Debarbieux
Bioinformatics 37 (17), 2798-2801, 2021
The iPPI-DB initiative: a community-centered database of protein–protein interaction modulators
R Torchet, K Druart, LC Ruano, A Moine-Franel, H Borges, ...
Bioinformatics 37 (1), 89-96, 2021
Community curation of bioinformatics software and data resources
J Ison, H Ménager, B Brancotte, E Jaaniso, A Salumets, T Raček, ...
Briefings in bioinformatics 21 (5), 1697-1705, 2020
Gene List significance at-a-glance with GeneValorization
B Brancotte, A Biton, I Bernard-Pierrot, F Radvanyi, F Reyal, ...
Bioinformatics 27 (8), 1187-1189, 2011
A comprehensive resource for Bordetella genomic epidemiology and biodiversity studies
S Bridel, V Bouchez, B Brancotte, S Hauck, N Armatys, A Landier, ...
Nature Communications 13 (1), 3807, 2022
Conqur-bio: Consensus ranking with query reformulation for biological data
B Brancotte, B Rance, A Denise, S Cohen-Boulakia
Data Integration in the Life Sciences: 10th International Conference, DILS …, 2014
EDAM: The bioscientific data analysis ontology (update 2021)[version 1; not peer reviewed]
M Black, L Lamothe, H Eldakroury, M Kierkegaard, A Priya, A Machinda, ...
F1000, 2021
Efficient, robust and effective rank aggregation for massive biological datasets
P Andrieu, B Brancotte, L Bulteau, S Cohen-Boulakia, A Denise, A Pierrot, ...
Future Generation Computer Systems 124, 406-421, 2021
A comprehensive resource for exploring antiphage defense: DefenseFinder webservice, wiki and databases
F Tesson, R Planel, A Egorov, H Georjon, H Vaysset, B Brancotte, ...
bioRxiv, 2024.01. 25.577194, 2024
A comprehensive resource for Bordetella genomic epidemiology and biodiversity studies. Nat Commun 13: 3807
S Bridel, V Bouchez, B Brancotte, S Hauck, N Armatys, A Landier, ...
A reusable tree-based web-visualization to browse EDAM ontology, and contribute to it.
B Brancotte, C Blanchet, H Ménager
Journal of Open Source Software 3 (27), 698, 2018
Reliability-aware and graph-based approach for rank aggregation of biological data
P Andrieu, B Brancotte, L Bulteau, S Cohen-Boulakia, A Denise, A Pierrot, ...
2019 15th International Conference on eScience (eScience), 136-145, 2019
High-Resolution Typing of Staphylococcus epidermidis Based on Core Genome Multilocus Sequence Typing To Investigate the Hospital Spread of Multidrug …
A Jamet, J Guglielmini, B Brancotte, M Coureuil, D Euphrasie, J Meyer, ...
Journal of Clinical Microbiology 59 (3), 10.1128/jcm. 02454-20, 2021
Agrégation de classements avec égalités: algorithmes, guides à l'utilisateur et applications aux données biologiques
B Brancotte
Université Paris Sud-Paris XI, 2015
Trait selection strategy in multi-trait GWAS: Boosting SNPs discoverability
Y Suzuki, H Ménager, B Brancotte, R Vernet, C Nerin, C Boetto, ...
Human Genetics and Genomics Advances, 2023
BioConvert: a comprehensive format converter for life sciences
H Caro, S Dollin, A Biton, B Brancotte, D Desvillechabrol, Y Dufresne, B Li, ...
NAR Genomics and Bioinformatics 5 (3), lqad074, 2023
Shiny-K8s, a toolkit to easily and reproducibly deploy your (R) Shiny app thanks to docker and Kubernetes (without mastering them!)
B Brancotte, E Chapeaublanc
JOBIM 2024, 2024
Web development, expertise of the Web INTEgRation group in the Bioinformatic and Biostatistics Hub
J Bonche, B Brancotte, E Chapeaublanc, A Dieuaide, S Malesys, ...
Journée Départementale du Département de Biologie Computationnelle de l …, 2024
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