| Similarity search for scientific workflows J Starlinger, B Brancotte, S Cohen-Boulakia, U Leser Proceedings of the VLDB Endowment (PVLDB) 7 (12), 1143-1154, 2014 | 73 | 2014 |
| Rank aggregation with ties: Experiments and analysis B Brancotte, B Yang, G Blin, S Cohen-Boulakia, A Denise, S Hamel Proceedings of the VLDB Endowment (PVLDB) 8 (11), 1202-1213, 2015 | 55 | 2015 |
| Viral Host Range database, an online tool for recording, analyzing and disseminating virus–host interactions Q Lamy-Besnier, B Brancotte, H Ménager, L Debarbieux Bioinformatics 37 (17), 2798-2801, 2021 | 29 | 2021 |
| The iPPI-DB initiative: a community-centered database of protein–protein interaction modulators R Torchet, K Druart, LC Ruano, A Moine-Franel, H Borges, ... Bioinformatics 37 (1), 89-96, 2021 | 25 | 2021 |
| Community curation of bioinformatics software and data resources J Ison, H Ménager, B Brancotte, E Jaaniso, A Salumets, T Raček, ... Briefings in bioinformatics 21 (5), 1697-1705, 2020 | 21 | 2020 |
| A comprehensive resource for Bordetella genomic epidemiology and biodiversity studies S Bridel, V Bouchez, B Brancotte, S Hauck, N Armatys, A Landier, ... Nature Communications 13 (1), 3807, 2022 | 20 | 2022 |
| Gene List significance at-a-glance with GeneValorization B Brancotte, A Biton, I Bernard-Pierrot, F Radvanyi, F Reyal, ... Bioinformatics 27 (8), 1187-1189, 2011 | 18 | 2011 |
| Conqur-bio: Consensus ranking with query reformulation for biological data B Brancotte, B Rance, A Denise, S Cohen-Boulakia Data Integration in the Life Sciences: 10th International Conference, DILS …, 2014 | 17 | 2014 |
| A comprehensive resource for exploring antiphage defense: DefenseFinder Webservice, Wiki and Databases F Tesson, R Planel, AA Egorov, H Georjon, H Vaysset, B Brancotte, ... Peer Community Journal 4, 2024 | 12 | 2024 |
| Efficient, robust and effective rank aggregation for massive biological datasets P Andrieu, B Brancotte, L Bulteau, S Cohen-Boulakia, A Denise, A Pierrot, ... Future Generation Computer Systems 124, 406-421, 2021 | 12 | 2021 |
| EDAM: The bioscientific data analysis ontology (update 2021)[version 1; not peer reviewed] M Black, L Lamothe, H Eldakroury, M Kierkegaard, A Priya, A Machinda, ... F1000, 2021 | 12 | 2021 |
| A comprehensive resource for Bordetella genomic epidemiology and biodiversity studies. Nat Commun 13: 3807 S Bridel, V Bouchez, B Brancotte, S Hauck, N Armatys, A Landier, ... | 5 | 2022 |
| A reusable tree-based web-visualization to browse EDAM ontology, and contribute to it. B Brancotte, C Blanchet, H Ménager Journal of Open Source Software 3 (27), 698, 2018 | 5 | 2018 |
| Reliability-aware and graph-based approach for rank aggregation of biological data P Andrieu, B Brancotte, L Bulteau, S Cohen-Boulakia, A Denise, A Pierrot, ... 2019 15th International Conference on eScience (eScience), 136-145, 2019 | 4 | 2019 |
| Bacterial strain nomenclature in the genomic era: Life Identification Numbers using a gene-by-gene approach F Palma, M Hennart, KA Jolley, C Crestani, KL Wyres, S Bridel, CA Yeats, ... bioRxiv, 2024.03. 11.584534, 2024 | 3 | 2024 |
| High-Resolution Typing of Staphylococcus epidermidis Based on Core Genome Multilocus Sequence Typing To Investigate the Hospital Spread of Multidrug … A Jamet, J Guglielmini, B Brancotte, M Coureuil, D Euphrasie, J Meyer, ... Journal of Clinical Microbiology 59 (3), 10.1128/jcm. 02454-20, 2021 | 3 | 2021 |
| Agrégation de classements avec égalités: algorithmes, guides ŕ l'utilisateur et applications aux données biologiques B Brancotte Université Paris Sud-Paris XI, 2015 | 2 | 2015 |
| Trait selection strategy in multi-trait GWAS: Boosting SNP discoverability Y Suzuki, H Ménager, B Brancotte, R Vernet, C Nerin, C Boetto, ... Human Genetics and Genomics Advances 5 (3), 2024 | 1 | 2024 |
| BioConvert: a comprehensive format converter for life sciences H Caro, S Dollin, A Biton, B Brancotte, D Desvillechabrol, Y Dufresne, B Li, ... NAR Genomics and Bioinformatics 5 (3), lqad074, 2023 | 1 | 2023 |
| BioFlow-Insight: facilitating reuse of Nextflow workflows with structure reconstruction and visualization G Marchment, B Brancotte, M Schmit, F Lemoine, S Cohen-Boulakia NAR Genomics and Bioinformatics 6 (3), 2024 | | 2024 |
Sarah Cohen-BoulakiaProfessor, Université Paris-SaclayVerified email at lri.fr
