Positional distribution of transcription factor binding sites in Arabidopsis thaliana CP Yu, JJ Lin, WH Li Scientific reports 6, 25164, 2016 | 115 | 2016 |
Anatomical and transcriptional dynamics of maize embryonic leaves during seed germination WY Liu, YM Chang, SCC Chen, CH Lu, YH Wu, MYJ Lu, DR Chen, ... Proceedings of the National Academy of Sciences 110 (10), 3979-3984, 2013 | 83 | 2013 |
Transcriptome dynamics of developing maize leaves and genomewide prediction of cis elements and their cognate transcription factors CP Yu, SCC Chen, YM Chang, WY Liu, HH Lin, JJ Lin, HJ Chen, YJ Lu, ... Proceedings of the National Academy of Sciences 112 (19), E2477-E2486, 2015 | 78 | 2015 |
Comparative transcriptomics method to infer gene coexpression networks and its applications to maize and rice leaf transcriptomes YM Chang, HH Lin, WY Liu, CP Yu, HJ Chen, PP Wartini, YY Kao, YH Wu, ... Proceedings of the National Academy of Sciences 116 (8), 3091-3099, 2019 | 75 | 2019 |
Comparative genomics of Vibrio campbellii strains and core species of the Vibrio Harveyi clade HM Ke, A Prachumwat, CP Yu, YT Yang, S Promsri, KF Liu, CF Lo, ... Scientific reports 7, 41394, 2017 | 46 | 2017 |
Elevated auxin biosynthesis and transport underlie high vein density in C4 leaves CF Huang, CP Yu, YH Wu, MYJ Lu, SL Tu, SH Wu, SH Shiu, MSB Ku, ... Proceedings of the National Academy of Sciences 114 (33), E6884-E6891, 2017 | 43 | 2017 |
Maize and millet transcription factors annotated using comparative genomic and transcriptomic data JJ Lin, CP Yu, YM Chang, SCC Chen, WH Li BMC genomics 15 (1), 818, 2014 | 21 | 2014 |
Regulatory Divergence among Beta-Keratin Genes during Bird Evolution MJ Bhattacharjee, CP Yu, JJ Lin, CS Ng, TY Wang, HH Lin, WH Li Molecular Biology and Evolution 33 (11), 2769-2780, 2016 | 15 | 2016 |
Insights into the regulation of C 4 leaf development from comparative transcriptomic analysis CF Huang, YM Chang, JJ Lin, CP Yu, HH Lin, WY Liu, S Yeh, SL Tu, ... Current opinion in plant biology 30, 1-10, 2016 | 15 | 2016 |
Identification and evolutionary analysis of long non-coding RNAs in zebra finch CK Chen, CP Yu, SC Li, SM Wu, MYJ Lu, YH Chen, DR Chen, CS Ng, ... BMC genomics 18 (1), 117, 2017 | 14 | 2017 |
Integrity of H1 helix in prion protein revealed by molecular dynamic simulations to be especially vulnerable to changes in the relative orientation of H1 and its S1 flank CY Tseng, CP Yu, HC Lee European Biophysics Journal 38 (5), 601-611, 2009 | 11 | 2009 |
Predicting transcription factor binding sites and their cognate transcription factors using gene expression data CP Yu, WH Li Plant Gene Regulatory Networks, 271-282, 2017 | 4 | 2017 |
Popmarker: Identifying Phylogenetic Markers at the Population Level HM Ke, CP Yu, YC Liu, IJ Tsai Evolutionary Bioinformatics 13, 1176934317724404, 2017 | 3 | 2017 |
From laws of inference to protein folding dynamics CY Tseng, CP Yu, HC Lee Physical Review E 82 (2), 021914, 2010 | 3 | 2010 |
Kinetics and Thermodynamics in the Folding of Trp-Cage: Simulation by Parallel-Tempering JL Lo, CP Yu, HC Lee | | 2005 |
Parallel Tempering Simulation of a Miniprotein: Trp-Cage CL Lo, CP Yu, HC Lee | | 2004 |